RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 TCAF1Q9Y4C2 921 aa16.57■□□□□ 0.24
BRCC3-202ENST00000340647 TCRBV7S3A2A0A539 114 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 ZNF891A8MT65 544 aaPredicted RBP16.56■□□□□ 0.24
BRCC3-202ENST00000340647 BTN3A1O00481 513 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 FGGP02679 453 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 APRTP07741 180 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 CCDC175P0C221 793 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 CXCR5P32302 372 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 NSG1P42857 185 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 CRADDP78560 199 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 CDC20Q12834 499 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 RPA4Q13156 261 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 TUBB3Q13509 450 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 GSE1Q14687 1217 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 GPR19Q15760 415 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 KLHL35Q6PF15 583 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 LDB1Q86U70 411 aaPredicted RBP16.56■□□□□ 0.24
BRCC3-202ENST00000340647 OOSP2Q86WS3 158 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 PPP1R3BQ86XI6 285 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 KMT5CQ86Y97 462 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 RASGRP3Q8IV61 690 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 PRELID2Q8N945 189 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 DNAAF3Q8N9W5 541 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 SIDT2Q8NBJ9 832 aaKnown RBP16.56■□□□□ 0.24
BRCC3-202ENST00000340647 STARD8Q92502 1023 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 TFGQ92734 400 aaPredicted RBP16.56■□□□□ 0.24
BRCC3-202ENST00000340647 SGSM3Q96HU1 749 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 CLMPQ9H6B4 373 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 XKR8Q9H6D3 395 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 CHRAC1Q9NRG0 131 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 FGF21Q9NSA1 209 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 TREX1Q9NSU2 369 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 GEMIN8Q9NWZ8 242 aaKnown RBP16.56■□□□□ 0.24
BRCC3-202ENST00000340647 PAK5Q9P286 719 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 ICKQ9UPZ9 632 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 PPP2R2CQ9Y2T4 447 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 COLEC10Q9Y6Z7 277 aa16.56■□□□□ 0.24
BRCC3-202ENST00000340647 TNRC6AQ8NDV7 1962 aaKnown RBP16.55■□□□□ 0.24
BRCC3-202ENST00000340647 HEATR9A2RTY3 570 aa16.55■□□□□ 0.24
BRCC3-202ENST00000340647 SLC9B1P1A6NJY1 282 aa16.55■□□□□ 0.24
BRCC3-202ENST00000340647 HCRTR1O43613 425 aa16.55■□□□□ 0.24
BRCC3-202ENST00000340647 NTRK1P04629 796 aa16.55■□□□□ 0.24
BRCC3-202ENST00000340647 PRKAR1AP10644 381 aa16.55■□□□□ 0.24
BRCC3-202ENST00000340647 ARNTP27540 789 aa16.55■□□□□ 0.24
BRCC3-202ENST00000340647 NDUFS1P28331 727 aa16.55■□□□□ 0.24
BRCC3-202ENST00000340647 PRDX3P30048 256 aaKnown RBP16.55■□□□□ 0.24
BRCC3-202ENST00000340647 DLSTP36957 453 aa16.55■□□□□ 0.24
BRCC3-202ENST00000340647 HSD11B2P80365 405 aa16.55■□□□□ 0.24
BRCC3-202ENST00000340647 NFATC3Q12968 1075 aa16.55■□□□□ 0.24
BRCC3-202ENST00000340647 PRKG2Q13237 762 aa16.55■□□□□ 0.24
BRCC3-202ENST00000340647 CRTC2Q53ET0 693 aaPredicted RBP16.55■□□□□ 0.24
BRCC3-202ENST00000340647 LCN10Q6JVE6 187 aa16.55■□□□□ 0.24
BRCC3-202ENST00000340647 BORAQ6PGQ7 559 aa16.55■□□□□ 0.24
BRCC3-202ENST00000340647 ZNF517Q6ZMY9 492 aaPredicted RBP16.55■□□□□ 0.24
BRCC3-202ENST00000340647 VRK3Q8IV63 474 aa16.55■□□□□ 0.24
BRCC3-202ENST00000340647 OR5AR1Q8NGP9 310 aa16.55■□□□□ 0.24
BRCC3-202ENST00000340647 LRRC45Q96CN5 670 aa16.55■□□□□ 0.24
BRCC3-202ENST00000340647 PITPNM3Q9BZ71 974 aa16.55■□□□□ 0.24
BRCC3-202ENST00000340647 LHX9Q9NQ69 397 aa16.55■□□□□ 0.24
BRCC3-202ENST00000340647 HEBP2Q9Y5Z4 205 aa16.55■□□□□ 0.24
BRCC3-202ENST00000340647 SPTA1P02549 2419 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 UBA6A0AVT1 1052 aaPredicted RBP16.54■□□□□ 0.24
BRCC3-202ENST00000340647 IQCF5A8MTL0 148 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 ZBTB11O95625 1053 aaPredicted RBP16.54■□□□□ 0.24
BRCC3-202ENST00000340647 PVRP15151 417 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 ST6GAL1P15907 406 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 CCR7P32248 378 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 POLE2P56282 527 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 ABRQ12979 859 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 BRD3Q15059 726 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 TTC27Q6P3X3 843 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 FAM199XQ6PEV8 388 aaPredicted RBP16.54■□□□□ 0.24
BRCC3-202ENST00000340647 PPP1R21Q6ZMI0 780 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 TMEM135Q86UB9 458 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 OR4L1Q8NH43 312 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 CT55Q8WUE5 264 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 LCN9Q8WX39 176 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 FCRL4Q96PJ5 515 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 HGH1Q9BTY7 390 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 MENTQ9BUN1 341 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 MVB12BQ9H7P6 319 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 EIF2B3Q9NR50 452 aaKnown RBP16.54■□□□□ 0.24
BRCC3-202ENST00000340647 LNPEPQ9UIQ6 1025 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 RARRES3Q9UL19 164 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 PCDHGA6Q9Y5G7 932 aa16.54■□□□□ 0.24
BRCC3-202ENST00000340647 RELNP78509 3460 aa16.53■□□□□ 0.24
BRCC3-202ENST00000340647 GOLGA6L6A8MZA4 724 aa16.53■□□□□ 0.24
BRCC3-202ENST00000340647 H3BMH7 237 aa16.53■□□□□ 0.24
BRCC3-202ENST00000340647 LIN7AO14910 233 aaPredicted RBP16.53■□□□□ 0.24
BRCC3-202ENST00000340647 GSTM1P09488 218 aa16.53■□□□□ 0.24
BRCC3-202ENST00000340647 NMBRP28336 390 aa16.53■□□□□ 0.24
BRCC3-202ENST00000340647 PEBP1P30086 187 aaKnown RBP16.53■□□□□ 0.24
BRCC3-202ENST00000340647 TUBB4BP68371 445 aa16.53■□□□□ 0.24
BRCC3-202ENST00000340647 GSTM4Q03013 218 aa16.53■□□□□ 0.24
BRCC3-202ENST00000340647 ACY1Q03154 408 aa16.53■□□□□ 0.24
BRCC3-202ENST00000340647 GPS2Q13227 327 aa16.53■□□□□ 0.24
BRCC3-202ENST00000340647 TUBB2AQ13885 445 aa16.53■□□□□ 0.24
BRCC3-202ENST00000340647 GRB7Q14451 532 aa16.53■□□□□ 0.24
BRCC3-202ENST00000340647 AFTPHQ6ULP2 937 aa16.53■□□□□ 0.24
BRCC3-202ENST00000340647 CARFQ8N187 725 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms