RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 CLPPQ16740 277 aaPredicted RBP13.87□□□□□ -0.19
CTSL-201ENST00000340342 C3orf62Q6ZUJ4 267 aa13.87□□□□□ -0.19
CTSL-201ENST00000340342 TMEM26Q6ZUK4 368 aa13.87□□□□□ -0.19
CTSL-201ENST00000340342 USP53Q70EK8 1073 aa13.87□□□□□ -0.19
CTSL-201ENST00000340342 OTOAQ7RTW8 1153 aa13.87□□□□□ -0.19
CTSL-201ENST00000340342 PROSER1Q86XN7 944 aa13.87□□□□□ -0.19
CTSL-201ENST00000340342 LSMEM2Q8N112 164 aa13.87□□□□□ -0.19
CTSL-201ENST00000340342 PHC3Q8NDX5 983 aa13.87□□□□□ -0.19
CTSL-201ENST00000340342 MDM1Q8TC05 714 aa13.87□□□□□ -0.19
CTSL-201ENST00000340342 PANX3Q96QZ0 392 aa13.87□□□□□ -0.19
CTSL-201ENST00000340342 FMO2Q99518 471 aa13.87□□□□□ -0.19
CTSL-201ENST00000340342 NDNQ99608 321 aa13.87□□□□□ -0.19
CTSL-201ENST00000340342 SLC30A3Q99726 388 aa13.87□□□□□ -0.19
CTSL-201ENST00000340342 NUDT22Q9BRQ3 303 aa13.87□□□□□ -0.19
CTSL-201ENST00000340342 ZFATQ9P243 1243 aa13.87□□□□□ -0.19
CTSL-201ENST00000340342 MTRF1LQ9UGC7 380 aaKnown RBP13.87□□□□□ -0.19
CTSL-201ENST00000340342 NFU1Q9UMS0 254 aa13.87□□□□□ -0.19
CTSL-201ENST00000340342 MED16Q9Y2X0 877 aa13.87□□□□□ -0.19
CTSL-201ENST00000340342 ENTPD2Q9Y5L3 495 aa13.87□□□□□ -0.19
CTSL-201ENST00000340342 USP24Q9UPU5 2620 aa13.87□□□□□ -0.19
CTSL-201ENST00000340342 LAMA5O15230 3695 aa13.87□□□□□ -0.19
CTSL-201ENST00000340342 ACACAQ13085 2346 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 ANKRD11Q6UB99 2663 aaPredicted RBP13.86□□□□□ -0.19
CTSL-201ENST00000340342 TCRBV9S1A1TA0A576 114 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 CXorf49A8MYA2 514 aaPredicted RBP13.86□□□□□ -0.19
CTSL-201ENST00000340342 D6RAR5 112 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 E5RI56 91 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 H3BMM5 538 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 IFRD1O00458 451 aaPredicted RBP13.86□□□□□ -0.19
CTSL-201ENST00000340342 GPC4O75487 556 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 APOA4P06727 396 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 CHRM3P20309 590 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 CSF2RBP32927 897 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 LSSP48449 732 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 CFHR1Q03591 330 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 SQSTM1Q13501 440 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 RBM20Q5T481 1227 aaKnown RBP13.86□□□□□ -0.19
CTSL-201ENST00000340342 ZNF449Q6P9G9 518 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 KIAA0408Q6ZU52 694 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 B3GNT8Q7Z7M8 397 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 IFT20Q8IY31 132 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 SLC22A15Q8IZD6 547 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 AVL9Q8NBF6 648 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 SIDT2Q8NBJ9 832 aaKnown RBP13.86□□□□□ -0.19
CTSL-201ENST00000340342 GIMAP7Q8NHV1 300 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 GABPB2Q8TAK5 448 aaPredicted RBP13.86□□□□□ -0.19
CTSL-201ENST00000340342 ASZ1Q8WWH4 475 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 SH3KBP1Q96B97 665 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 ATXN7L3BQ96GX2 97 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 TMEM74Q96NL1 305 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 NRTNQ99748 197 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 FAM129AQ9BZQ8 928 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 CCDC68Q9H2F9 335 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 LRRC4CQ9HCJ2 640 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 RUVBL2Q9Y230 463 aaKnown RBP13.86□□□□□ -0.19
CTSL-201ENST00000340342 KMT2BQ9UMN6 2715 aaPredicted RBP13.86□□□□□ -0.19
CTSL-201ENST00000340342 SNRNP200O75643 2136 aaKnown RBP13.86□□□□□ -0.19
CTSL-201ENST00000340342 ZFHX4Q86UP3 3567 aa13.86□□□□□ -0.19
CTSL-201ENST00000340342 ZZEF1O43149 2961 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 LILRA5A6NI73 299 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 TAF4O00268 1085 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 SLCO2B1O94956 709 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 TYRP1P17643 537 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 ACADLP28330 430 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 CD151P48509 253 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 CLCN7P51798 805 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 PGGT1BP53609 377 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 TIAL1Q01085 375 aaKnown RBP eCLIP13.85□□□□□ -0.19
CTSL-201ENST00000340342 CUL1Q13616 776 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 KRT33BQ14525 404 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 TMED2Q15363 201 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 MAP9Q49MG5 647 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 STRA8Q7Z7C7 330 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 PIM3Q86V86 326 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 GSPT2Q8IYD1 628 aaKnown RBP13.85□□□□□ -0.19
CTSL-201ENST00000340342 ZBTB2Q8N680 514 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 OR5AR1Q8NGP9 310 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 OR10G6Q8NH81 332 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 TFGQ92734 400 aaPredicted RBP13.85□□□□□ -0.19
CTSL-201ENST00000340342 AHCYL2Q96HN2 611 aaKnown RBP13.85□□□□□ -0.19
CTSL-201ENST00000340342 FERD3LQ96RJ6 166 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 GPR21Q99679 349 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 AARSD1Q9BTE6 412 aaKnown RBP13.85□□□□□ -0.19
CTSL-201ENST00000340342 HGH1Q9BTY7 390 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.85□□□□□ -0.19
CTSL-201ENST00000340342 ZMYND15Q9H091 742 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 ANKZF1Q9H8Y5 726 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 POLR1BQ9H9Y6 1135 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 UCK1Q9HA47 277 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 NINJ2Q9NZG7 142 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 OGFRQ9NZT2 677 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 TMEM9Q9P0T7 183 aa13.85□□□□□ -0.19
CTSL-201ENST00000340342 URB1O60287 2271 aaKnown RBP13.84□□□□□ -0.19
CTSL-201ENST00000340342 AGRPO00253 132 aa13.84□□□□□ -0.19
CTSL-201ENST00000340342 KPNA5O15131 536 aa13.84□□□□□ -0.19
CTSL-201ENST00000340342 UBXN7O94888 489 aa13.84□□□□□ -0.19
CTSL-201ENST00000340342 CPNE6O95741 557 aa13.84□□□□□ -0.19
CTSL-201ENST00000340342 C1QAP02745 245 aa13.84□□□□□ -0.19
CTSL-201ENST00000340342 HOXB3P14651 431 aaPredicted RBP13.84□□□□□ -0.19
CTSL-201ENST00000340342 MPSTP25325 297 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms