RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 FAM124AQ86V42 546 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 KIRREL3Q8IZU9 778 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 ZNF687Q8N1G0 1237 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 AFAP1L2Q8N4X5 818 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 OR56A4Q8NGH8 313 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 NSL1Q96IY1 281 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 NOL11Q9H8H0 719 aaKnown RBP20.73■□□□□ 0.91
VRK2-201ENST00000340157 KLC4Q9NSK0 619 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 ARL15Q9NXU5 204 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 GPR34Q9UPC5 381 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 PRKAB1Q9Y478 270 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 ARHGEF33A8MVX0 844 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 MYO1CO00159 1063 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 CHUKO15111 745 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 PSIP1O75475 530 aaKnown RBP20.73■□□□□ 0.91
VRK2-201ENST00000340157 ATP5HO75947 161 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 ENO1P06733 434 aaKnown RBP20.73■□□□□ 0.91
VRK2-201ENST00000340157 CD1EP15812 388 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 GABRG2P18507 467 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 ERVPABLB-1P60509 514 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 TFF2Q03403 129 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 ABRQ12979 859 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 MLF2Q15773 248 aaPredicted RBP20.73■□□□□ 0.91
VRK2-201ENST00000340157 CDKL4Q5MAI5 379 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 LETMD1Q6P1Q0 360 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 HORMAD1Q86X24 394 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 TEX9Q8N6V9 391 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 TWIST2Q8WVJ9 160 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 ZNF514Q96K75 400 aaPredicted RBP20.73■□□□□ 0.91
VRK2-201ENST00000340157 CDK15Q96Q40 435 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 SLC17A9Q9BYT1 436 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 LNPEPQ9UIQ6 1025 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 TIMM22Q9Y584 194 aa20.73■□□□□ 0.91
VRK2-201ENST00000340157 TCRBV21S2A2A0A5A6 115 aa20.72■□□□□ 0.91
VRK2-201ENST00000340157 DCXO43602 365 aa20.72■□□□□ 0.91
VRK2-201ENST00000340157 ANXA5P08758 320 aa20.72■□□□□ 0.91
VRK2-201ENST00000340157 TEAD1P28347 426 aa20.72■□□□□ 0.91
VRK2-201ENST00000340157 MAT2AP31153 395 aaKnown RBP20.72■□□□□ 0.91
VRK2-201ENST00000340157 KCNJ2P63252 427 aa20.72■□□□□ 0.91
VRK2-201ENST00000340157 GTF2H3Q13889 308 aa20.72■□□□□ 0.91
VRK2-201ENST00000340157 PLA2G4EQ3MJ16 856 aa20.72■□□□□ 0.91
VRK2-201ENST00000340157 KIAA1324Q6UXG2 1013 aaKnown RBP20.72■□□□□ 0.91
VRK2-201ENST00000340157 GPRIN3Q6ZVF9 776 aa20.72■□□□□ 0.91
VRK2-201ENST00000340157 ACTRT2Q8TDY3 377 aa20.72■□□□□ 0.91
VRK2-201ENST00000340157 KLHL29Q96CT2 875 aa20.72■□□□□ 0.91
VRK2-201ENST00000340157 C19orf60Q96EN9 201 aa20.72■□□□□ 0.91
VRK2-201ENST00000340157 LRMDAQ9H2I8 198 aa20.72■□□□□ 0.91
VRK2-201ENST00000340157 PREBQ9HCU5 417 aa20.72■□□□□ 0.91
VRK2-201ENST00000340157 DUSP12Q9UNI6 340 aa20.72■□□□□ 0.91
VRK2-201ENST00000340157 CAPN7Q9Y6W3 813 aa20.72■□□□□ 0.91
VRK2-201ENST00000340157 COL6A3P12111 3177 aa20.72■□□□□ 0.91
VRK2-201ENST00000340157 TBC1D3DA0A087WVF3 549 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 TBC1D3IA0A087WXS9 549 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 TBC1D3EA0A087X179 549 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 TBC1D3KA0A087X1G2 549 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 TBC1D3FA6NER0 549 aaPredicted RBP20.71■□□□□ 0.91
VRK2-201ENST00000340157 TBC1D3LB9A6J9 549 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 PIP5K1BO14986 540 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 CCNT2O60583 730 aaKnown RBP20.71■□□□□ 0.91
VRK2-201ENST00000340157 POP7O75817 140 aaKnown RBP20.71■□□□□ 0.91
VRK2-201ENST00000340157 OR4F21O95013 312 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 TBC1D3HP0C7X1 549 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 IGFALSP35858 605 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 GGT5P36269 586 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 TRAF3Q13114 568 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 MAP7D1Q3KQU3 841 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 TMEM31Q5JXX7 168 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 TBC1D3GQ6DHY5 549 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 NXNQ6DKJ4 435 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 TBC1D3CQ6IPX1 549 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 FAM83HQ6ZRV2 1179 aaPredicted RBP20.71■□□□□ 0.91
VRK2-201ENST00000340157 KBTBD6Q86V97 674 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 CFAP206Q8IYR0 622 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 TBC1D3Q8IZP1 549 aaPredicted RBP20.71■□□□□ 0.91
VRK2-201ENST00000340157 MARK4Q96L34 752 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 FZD3Q9NPG1 666 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 ARHGEF3Q9NR81 526 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 LIN7AO14910 233 aaPredicted RBP20.71■□□□□ 0.91
VRK2-201ENST00000340157 CHRNB1P11230 501 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 EPORP19235 508 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 CALB2P22676 271 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 ACSL1P33121 698 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 SGCGQ13326 291 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 NFE2L1Q14494 772 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 TBCCQ15814 346 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 CCSMST1Q4G0I0 132 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 LARP4Q71RC2 724 aaKnown RBP eCLIP20.71■□□□□ 0.91
VRK2-201ENST00000340157 CFAP61Q8NHU2 1237 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 CATSPER2Q96P56 530 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 WDR26Q9H7D7 661 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 IPPKQ9H8X2 491 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 SLC23A2Q9UGH3 650 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 G3BP2Q9UN86 482 aaKnown RBP20.71■□□□□ 0.91
VRK2-201ENST00000340157 BTRCQ9Y297 605 aa20.71■□□□□ 0.91
VRK2-201ENST00000340157 C17orf113A0A1B0GUU1 675 aa20.7■□□□□ 0.9
VRK2-201ENST00000340157 ATP6AP2A0A1C7CYW4 349 aa20.7■□□□□ 0.9
VRK2-201ENST00000340157 K7EPI3 171 aa20.7■□□□□ 0.9
VRK2-201ENST00000340157 ATP6AP2O75787 350 aa20.7■□□□□ 0.9
VRK2-201ENST00000340157 FUCA1P04066 466 aa20.7■□□□□ 0.9
VRK2-201ENST00000340157 CYP2A7P20853 494 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms