RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 PIK3R6Q5UE93 754 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 KRT39Q6A163 491 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 CLEC6AQ6EIG7 209 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 KLHL17Q6TDP4 642 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 ARHGAP36Q6ZRI8 547 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 NIPA1Q7RTP0 329 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 LAX1Q8IWV1 398 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 PELI3Q8N2H9 469 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 FBXL13Q8NEE6 735 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 OR4D10Q8NGI6 311 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 SPPL2BQ8TCT7 592 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 DNAJA4Q8WW22 397 aaPredicted RBP9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 APOL4Q9BPW4 351 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 TSEN34Q9BSV6 310 aaKnown RBP9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 OSGEPL1Q9H4B0 414 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 RNF121Q9H920 327 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 GPATCH2LQ9NWQ4 482 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 RAB23Q9ULC3 237 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 ATXN7L1Q9ULK2 861 aaPredicted RBP9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 PLCL2Q9UPR0 1127 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 RNF6Q9Y252 685 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 TMX2Q9Y320 296 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 NAALAD2Q9Y3Q0 740 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 PCDHB14Q9Y5E9 798 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 TNPO3Q9Y5L0 923 aaKnown RBP9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 IRS2Q9Y4H2 1338 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 LOC100130705A0A1B0GUX0 176 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 USP17L10C9JJH3 530 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 FXYD1O00168 92 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 ATG12O94817 140 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 GPIP06744 558 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 SBK3P0C264 359 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 HK1P19367 917 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 BNC1Q01954 994 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 SEMA3BQ13214 749 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 CDH18Q13634 790 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 UGT3A2Q3SY77 523 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 SYT6Q5T7P8 510 aaPredicted RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 FAM183BPQ6ZVS7 135 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 SV2AQ7L0J3 742 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 NT5DC4Q86YG4 428 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 DMRTC2Q8IXT2 367 aaPredicted RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 CYP4Z2PQ8N1L4 340 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 OR10Q1Q8NGQ4 319 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 ASB15Q8WXK1 588 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 TTLL2Q9BWV7 592 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 PDZD7Q9H5P4 517 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 CARS2Q9HA77 564 aaKnown RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 GSN-AS1Q9NRJ2 163 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 SLAMF8Q9P0V8 285 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 COPZ2Q9P299 210 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 MGAT4AQ9UM21 535 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 MAPRE3Q9UPY8 281 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 KCNMB2Q9Y691 235 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 SBF2Q86WG5 1849 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 SMIM30A4D0T7 59 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 TMEM150BA6NC51 233 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 NT5C1B-RDH14C9J2C7 533 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 APOL1O14791 398 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 STAU1O95793 577 aaKnown RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 ARP10275 920 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 SLC2A3P11169 496 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 DARSP14868 501 aaKnown RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 HOXA1P49639 335 aaPredicted RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 RPL6Q02878 288 aaKnown RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 SLC25A11Q02978 314 aaKnown RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 SMAD2Q15796 467 aaKnown RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 ZNF79Q15937 498 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 SNRNP35Q16560 246 aaKnown RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 SPOUT1Q5T280 376 aaKnown RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 MPP7Q5T2T1 576 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 STXBP5Q5T5C0 1151 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 SH3PXD2AQ5TCZ1 1133 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 RNF180Q86T96 592 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 SYVN1Q86TM6 617 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 CCDC190Q86UF4 302 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 RASGRP3Q8IV61 690 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 DAW1Q8N136 415 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 C2CD4CQ8TF44 421 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 APBB2Q92870 758 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 FUBP1Q96AE4 644 aaKnown RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 TNIP3Q96KP6 325 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 GAS2L1Q99501 681 aaPredicted RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 GPR63Q9BZJ6 419 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 OSBPL2Q9H1P3 480 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 OR51B5Q9H339 312 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 TRIM45Q9H8W5 580 aaPredicted RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 CD93Q9NPY3 652 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 ACTR10Q9NZ32 417 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 USE1Q9NZ43 259 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 SEPT9Q9UHD8 586 aaPredicted RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 TBX20Q9UMR3 447 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 CACNA1SQ13698 1873 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 A0A096LPI6 279 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 G3V2T6 193 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 APOC4-APOC2K7ER74 178 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 SLC22A2O15244 555 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 FAM20BO75063 409 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 GNRH1P01148 92 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 APOC2P02655 101 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 317.2 ms