RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 ZNF366Q8N895 744 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 DEDD2Q8WXF8 326 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 MARVELD3Q96A59 401 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 ZFP42Q96MM3 310 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 PHOX2BQ99453 314 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 FICDQ9BVA6 458 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 RHOJQ9H4E5 214 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 PRDM8Q9NQV8 689 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 TMEM39AQ9NV64 488 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 POLR3BQ9NW08 1133 aaPredicted RBP12.4□□□□□ -0.42
DFFB-202ENST00000339350 SLC39A1Q9NY26 324 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 TAS2R9Q9NYW1 312 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 EGFL7Q9UHF1 273 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 PRSS44E7EML9 344 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 NRP2O60462 931 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 SLC25A27O95847 323 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 STMN1P16949 149 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 KELP23276 732 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 AXLP30530 894 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 ZBTB6Q15916 424 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 PLEKHG6Q3KR16 790 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 FBXO48Q5FWF7 155 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 TBCELQ5QJ74 424 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 REP15Q6BDI9 236 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 SLC27A1Q6PCB7 646 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 CFAP77Q6ZQR2 320 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 MICU2Q8IYU8 434 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 CRYBG2Q8N1P7 616 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 OR6P1Q8NGX9 317 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 PHF10Q8WUB8 498 aaKnown RBP12.4□□□□□ -0.42
DFFB-202ENST00000339350 C16orf70Q9BSU1 422 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 DUSP16Q9BY84 665 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 IL22Q9GZX6 179 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 TKTL2Q9H0I9 626 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 ZNF224Q9NZL3 707 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 OR12D3Q9UGF7 316 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 SCML1Q9UN30 329 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 SNX6Q9UNH7 406 aa12.4□□□□□ -0.42
DFFB-202ENST00000339350 PRSS47A8MTI9 375 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 LRIG2O94898 1065 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 GNRH1P01148 92 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 NPR3P17342 541 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 PRKAR1BP31321 381 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 SHMT2P34897 504 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 MAGEA11P43364 429 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 GP2P55259 537 aaKnown RBP12.4□□□□□ -0.43
DFFB-202ENST00000339350 RAB10P61026 200 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 CDH17Q12864 832 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 SLAMF1Q13291 335 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 PCBP1Q15365 356 aaKnown RBP eCLIP12.4□□□□□ -0.43
DFFB-202ENST00000339350 DPY19L1Q2PZI1 675 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 ALG1LQ6GMV1 187 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 SULT1C3Q6IMI6 304 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 TXNDC11Q6PKC3 985 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 CCDC36Q8IYA8 594 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 MCFD2Q8NI22 146 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 DYNC2LI1Q8TCX1 351 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 TMEM40Q8WWA1 233 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 KIFC1Q9BW19 673 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 YTHDF1Q9BYJ9 559 aaKnown RBP12.4□□□□□ -0.43
DFFB-202ENST00000339350 SLC6A17Q9H1V8 727 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 ZNF556Q9HAH1 456 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 SMPD3Q9NY59 655 aaPredicted RBP12.4□□□□□ -0.43
DFFB-202ENST00000339350 ADGRE2Q9UHX3 823 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 KCNH4Q9UQ05 1017 aa12.4□□□□□ -0.43
DFFB-202ENST00000339350 TTC24A2A3L6 582 aaPredicted RBP12.39□□□□□ -0.43
DFFB-202ENST00000339350 RGS5O15539 181 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 CDK14O94921 469 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 MSH3P20585 1137 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 IL12RB1P42701 662 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 MTHFRP42898 656 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 PRIM2P49643 509 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 SLC7A2P52569 658 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 ERVK-21P61565 698 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 ALDH6A1Q02252 535 aaKnown RBP12.39□□□□□ -0.43
DFFB-202ENST00000339350 BTN1A1Q13410 526 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 PRPSAP1Q14558 356 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 TAGAPQ8N103 731 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 GPRC5AQ8NFJ5 357 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 SPPL2BQ8TCT7 592 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 SH3RF2Q8TEC5 729 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 BRI3BPQ8WY22 251 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 GPR78Q96P69 363 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 NEDD4LQ96PU5 975 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 SLIRPQ9GZT3 109 aaKnown RBP12.39□□□□□ -0.43
DFFB-202ENST00000339350 CCDC90BQ9GZT6 254 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 MRM3Q9HC36 420 aaKnown RBP12.39□□□□□ -0.43
DFFB-202ENST00000339350 ENTPD7Q9NQZ7 604 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 SPATA6Q9NWH7 488 aaPredicted RBP12.39□□□□□ -0.43
DFFB-202ENST00000339350 CACNA2D2Q9NY47 1150 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 GPRC5BQ9NZH0 403 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 RCOR3Q9P2K3 495 aaPredicted RBP12.39□□□□□ -0.43
DFFB-202ENST00000339350 CPA4Q9UI42 421 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 V9GYQ6 96 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 TRIP12Q14669 1992 aaPredicted RBP12.39□□□□□ -0.43
DFFB-202ENST00000339350 MICAL3Q7RTP6 2002 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 PLXNA1Q9UIW2 1896 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 LOC285556D6RIA3 1793 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 MEIS3P2A8K0S8 358 aa12.39□□□□□ -0.43
DFFB-202ENST00000339350 TARM1B6A8C7 271 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms