RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 COPZ1P61923 177 aa13.91□□□□□ -0.18
PCDH8-201ENST00000338862 TAB1Q15750 504 aa13.91□□□□□ -0.18
PCDH8-201ENST00000338862 NIPAL1Q6NVV3 410 aa13.91□□□□□ -0.18
PCDH8-201ENST00000338862 AGMOQ6ZNB7 445 aa13.91□□□□□ -0.18
PCDH8-201ENST00000338862 SCD5Q86SK9 330 aa13.91□□□□□ -0.18
PCDH8-201ENST00000338862 HIPK1Q86Z02 1210 aa13.91□□□□□ -0.18
PCDH8-201ENST00000338862 GPR156Q8NFN8 814 aa13.91□□□□□ -0.18
PCDH8-201ENST00000338862 FUBP1Q96AE4 644 aaKnown RBP13.91□□□□□ -0.18
PCDH8-201ENST00000338862 PANX1Q96RD7 426 aa13.91□□□□□ -0.18
PCDH8-201ENST00000338862 RBM4BQ9BQ04 359 aaKnown RBP13.91□□□□□ -0.18
PCDH8-201ENST00000338862 DPH2Q9BQC3 489 aaPredicted RBP13.91□□□□□ -0.18
PCDH8-201ENST00000338862 RBM4Q9BWF3 364 aaKnown RBP13.91□□□□□ -0.18
PCDH8-201ENST00000338862 TBCCD1Q9NVR7 557 aa13.91□□□□□ -0.18
PCDH8-201ENST00000338862 PCDHA9Q9Y5H5 950 aa13.91□□□□□ -0.18
PCDH8-201ENST00000338862 RAI2Q9Y5P3 530 aa13.91□□□□□ -0.18
PCDH8-201ENST00000338862 H0YJX3 145 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 RFXANKO14593 260 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 PER2O15055 1255 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 SLC25A14O95258 325 aaPredicted RBP13.9□□□□□ -0.18
PCDH8-201ENST00000338862 DNTTP04053 509 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 UMPSP11172 480 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 PFKLP17858 780 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 LPOP22079 712 aaPredicted RBP13.9□□□□□ -0.18
PCDH8-201ENST00000338862 PPP3CCP48454 512 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 EEFSECP57772 596 aaKnown RBP13.9□□□□□ -0.18
PCDH8-201ENST00000338862 SKIV2LQ15477 1246 aaKnown RBP13.9□□□□□ -0.18
PCDH8-201ENST00000338862 SF1Q15637 639 aaKnown RBP13.9□□□□□ -0.18
PCDH8-201ENST00000338862 Q6ZPB1 254 aaPredicted RBP13.9□□□□□ -0.18
PCDH8-201ENST00000338862 VTCN1Q7Z7D3 282 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 SLC22A17Q8WUG5 538 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 KIAA1191Q96A73 305 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 SH3YL1Q96HL8 342 aaPredicted RBP13.9□□□□□ -0.18
PCDH8-201ENST00000338862 TSGA13Q96PP4 275 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 PRRG3Q9BZD7 231 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 TRIM39Q9HCM9 518 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 CAB39Q9Y376 341 aaPredicted RBP13.9□□□□□ -0.18
PCDH8-201ENST00000338862 RGS14O43566 566 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 PIM1P11309 404 aaPredicted RBP13.9□□□□□ -0.18
PCDH8-201ENST00000338862 ZNF792Q3KQV3 632 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 FAM117BQ6P1L5 589 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 MSANTD2Q6P1R3 559 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 CNTN4Q8IWV2 1026 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 KCNC2Q96PR1 638 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 CEP44Q9C0F1 390 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 TFB2MQ9H5Q4 396 aaKnown RBP13.9□□□□□ -0.18
PCDH8-201ENST00000338862 USE1Q9NZ43 259 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 COL11A2P13942 1736 aaPredicted RBP13.9□□□□□ -0.18
PCDH8-201ENST00000338862 COL1A2P08123 1366 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 SLC1A7O00341 560 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 SERPINB7O75635 380 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 NDST3O95803 873 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 MT-ND2P03891 347 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 RHOQP17081 205 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 HLA-DPA1P20036 260 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 CRHBPP24387 322 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 DCKP27707 260 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 ADRA1AP35348 466 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 MRPS6P82932 125 aaKnown RBP13.9□□□□□ -0.18
PCDH8-201ENST00000338862 MED22Q15528 200 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 PDE12Q6L8Q7 609 aaKnown RBP13.9□□□□□ -0.18
PCDH8-201ENST00000338862 ALKAL1Q6UXT8 129 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 PGBD5Q8N414 524 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 RNF175Q8N4F7 328 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 SPATA17Q96L03 361 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 DNAJB9Q9UBS3 223 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 AGO1Q9UL18 857 aaKnown RBP13.9□□□□□ -0.18
PCDH8-201ENST00000338862 TESMINQ9Y4I5 508 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 MYO7AQ13402 2215 aa13.9□□□□□ -0.18
PCDH8-201ENST00000338862 RBBP6Q7Z6E9 1792 aaKnown RBP13.9□□□□□ -0.18
PCDH8-201ENST00000338862 GABRDO14764 452 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 VIPP01282 170 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 AQP6Q13520 282 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 KANK2Q63ZY3 851 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 MON1AQ86VX9 555 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 TTC29Q8NA56 475 aaPredicted RBP13.89□□□□□ -0.19
PCDH8-201ENST00000338862 DACT3Q96B18 629 aaPredicted RBP13.89□□□□□ -0.19
PCDH8-201ENST00000338862 CSF3RQ99062 836 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 ACBD6Q9BR61 282 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 SIAEQ9HAT2 523 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 CPQQ9Y646 472 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 HTR3EA5X5Y0 456 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 RPL17P18621 184 aaKnown RBP13.89□□□□□ -0.19
PCDH8-201ENST00000338862 RGRP47804 291 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 TAF1CQ15572 869 aaPredicted RBP13.89□□□□□ -0.19
PCDH8-201ENST00000338862 AFTPHQ6ULP2 937 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 SCML4Q8N228 414 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 KLHDC9Q8NEP7 349 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 TRUB1Q8WWH5 349 aaKnown RBP13.89□□□□□ -0.19
PCDH8-201ENST00000338862 ATOH8Q96SQ7 321 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 TDRD1Q9BXT4 1180 aaKnown RBP13.89□□□□□ -0.19
PCDH8-201ENST00000338862 LRTM1Q9HBL6 345 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 C14orf119Q9NWQ9 140 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 EHD3Q9NZN3 535 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 FCF1Q9Y324 198 aaKnown RBP13.89□□□□□ -0.19
PCDH8-201ENST00000338862 PPP2R3BQ9Y5P8 575 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 ZFP37Q9Y6Q3 630 aaPredicted RBP13.89□□□□□ -0.19
PCDH8-201ENST00000338862 EFCAB9A8MZ26 197 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 PGRP06401 933 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 FDXRP22570 491 aa13.89□□□□□ -0.19
PCDH8-201ENST00000338862 TCEA1P23193 301 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms