RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 CD244Q9BZW8 370 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 ZDHHC7Q9NXF8 308 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 PDE10AQ9Y233 779 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 AP4B1Q9Y6B7 739 aa22.66■■□□□ 1.22
CLPTM1-201ENST00000337392 HELZP42694 1942 aaKnown RBP22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 MTCL1Q9Y4B5 1905 aaKnown RBP22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 A0A1W2PP18 115 aa22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 A0A1W2PQ67 120 aa22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 OTOL1A6NHN0 477 aaPredicted RBP22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 HLA-EP13747 358 aa22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 EPORP19235 508 aa22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 ITPKAP23677 461 aa22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 PSMD8P48556 350 aa22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 RPIAP49247 311 aa22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 MCCC1Q96RQ3 725 aaPredicted RBP22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 ZDHHC3Q9NYG2 299 aa22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 SUN2Q9UH99 717 aa22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 COQ6Q9Y2Z9 468 aa22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 GOLGA4Q13439 2230 aaKnown RBP22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 PDLIM1O00151 329 aa22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 SH3BGRLO75368 114 aa22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 ZNF77Q15935 545 aa22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 CYP20A1Q6UW02 462 aa22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 TMEM125Q96AQ2 219 aa22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 ROPN1LQ96C74 230 aa22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 NUSAP1Q9BXS6 441 aaKnown RBP22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 PCDH12Q9NPG4 1184 aa22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 ERVW-1Q9UQF0 538 aa22.65■■□□□ 1.22
CLPTM1-201ENST00000337392 LIN7AO14910 233 aaPredicted RBP22.64■■□□□ 1.22
CLPTM1-201ENST00000337392 C8BP07358 591 aa22.64■■□□□ 1.22
CLPTM1-201ENST00000337392 CREMQ03060 361 aa22.64■■□□□ 1.22
CLPTM1-201ENST00000337392 GSTA3Q16772 222 aa22.64■■□□□ 1.22
CLPTM1-201ENST00000337392 ZFP1Q6P2D0 407 aa22.64■■□□□ 1.22
CLPTM1-201ENST00000337392 TMC5Q6UXY8 1006 aa22.64■■□□□ 1.22
CLPTM1-201ENST00000337392 TICAM1Q8IUC6 712 aa22.64■■□□□ 1.22
CLPTM1-201ENST00000337392 LYSMD1Q96S90 227 aa22.64■■□□□ 1.22
CLPTM1-201ENST00000337392 WRAP53Q9BUR4 548 aaKnown RBP22.64■■□□□ 1.22
CLPTM1-201ENST00000337392 SAC3D1A6NKF1 404 aa22.64■■□□□ 1.21
CLPTM1-201ENST00000337392 FADS2P1A8MWK0 482 aa22.64■■□□□ 1.21
CLPTM1-201ENST00000337392 INPP4BO15327 924 aa22.64■■□□□ 1.21
CLPTM1-201ENST00000337392 AKAP10O43572 662 aa22.64■■□□□ 1.21
CLPTM1-201ENST00000337392 PGM3O95394 542 aa22.64■■□□□ 1.21
CLPTM1-201ENST00000337392 GSK3BP49841 420 aa22.64■■□□□ 1.21
CLPTM1-201ENST00000337392 UBE2R2Q712K3 238 aaPredicted RBP22.64■■□□□ 1.21
CLPTM1-201ENST00000337392 TRIM74Q86UV6 250 aa22.64■■□□□ 1.21
CLPTM1-201ENST00000337392 CACUL1Q86Y37 369 aa22.64■■□□□ 1.21
CLPTM1-201ENST00000337392 MRGPRX3Q96LB0 322 aa22.64■■□□□ 1.21
CLPTM1-201ENST00000337392 RIOK2Q9BVS4 552 aaKnown RBP22.64■■□□□ 1.21
CLPTM1-201ENST00000337392 PCDHA9Q9Y5H5 950 aa22.64■■□□□ 1.21
CLPTM1-201ENST00000337392 TCRBV3S1A0A5B6 114 aa22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 AGAP14A8MT82 685 aa22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 EFCAB14O75071 495 aa22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 EN2P19622 333 aaPredicted RBP22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 RPL10P27635 214 aaKnown RBP22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 NANOGP8Q6NSW7 305 aa22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 P2RY13Q9BPV8 354 aa22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 BRINP2Q9C0B6 783 aa22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 NANOGQ9H9S0 305 aa22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 ABCD2Q9UBJ2 740 aa22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 ZNF490Q9ULM2 529 aaPredicted RBP22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 CCL27Q9Y4X3 112 aa22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 ZNF106Q9H2Y7 1883 aaKnown RBP22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 LINC01553A4QN01 128 aa22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 ARPC2O15144 300 aa22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 OTCP00480 354 aa22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 GPR33Q49SQ1 333 aa22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 IYDQ6PHW0 289 aa22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 ADGRD2Q7Z7M1 963 aa22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 FRS2Q8WU20 508 aa22.63■■□□□ 1.21
CLPTM1-201ENST00000337392 C15orf38-AP3S2A0A0A6YYH1 394 aa22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 WASH3PC4AMC7 463 aa22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 PRAMEF4O60810 478 aa22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 ZNF26P17031 533 aaPredicted RBP22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 POLR2EP19388 210 aaKnown RBP22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 PREPP48147 710 aa22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 LIPEQ05469 1076 aa22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 SF1Q15637 639 aaKnown RBP22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 CCSMST1Q4G0I0 132 aa22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 PRAMEF9Q5VWM5 478 aa22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 SPATA19Q7Z5L4 167 aa22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 ARPINQ7Z6K5 226 aa22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 RGL4Q8IZJ4 473 aa22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 NXPE3Q969Y0 559 aa22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 RAD9AQ99638 391 aa22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 VCX3BQ9H321 246 aa22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 ALG2Q9H553 416 aa22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 RIC8BQ9NVN3 520 aa22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 BBIP1A8MTZ0 92 aa22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 C1QCP02747 245 aa22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 RECQLP46063 649 aaPredicted RBP22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 SUSD1Q6UWL2 747 aa22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 CBARPQ8N350 705 aaPredicted RBP22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 GFM2Q969S9 779 aaKnown RBP22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 TNPO3Q9Y5L0 923 aaKnown RBP22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 TCF20Q9UGU0 1960 aaKnown RBP22.62■■□□□ 1.21
CLPTM1-201ENST00000337392 PBLDP30039 288 aaPredicted RBP22.61■■□□□ 1.21
CLPTM1-201ENST00000337392 CTSCP53634 463 aa22.61■■□□□ 1.21
CLPTM1-201ENST00000337392 OR4D2P58180 307 aa22.61■■□□□ 1.21
CLPTM1-201ENST00000337392 ILF2Q12905 390 aaKnown RBP22.61■■□□□ 1.21
CLPTM1-201ENST00000337392 NEK5Q6P3R8 708 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms