RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 COMMD3-BMI1R4GMX3 469 aa18.56■□□□□ 0.56
RFTN1-201ENST00000334133 UPK3BL1B0FP48 263 aa18.56■□□□□ 0.56
RFTN1-201ENST00000334133 UPK3BL2E5RIL1 263 aa18.56■□□□□ 0.56
RFTN1-201ENST00000334133 CCR7P32248 378 aa18.56■□□□□ 0.56
RFTN1-201ENST00000334133 PPP3CCP48454 512 aa18.56■□□□□ 0.56
RFTN1-201ENST00000334133 VEGFBP49765 207 aa18.56■□□□□ 0.56
RFTN1-201ENST00000334133 CRY1Q16526 586 aa18.56■□□□□ 0.56
RFTN1-201ENST00000334133 ZNF648Q5T619 568 aaPredicted RBP18.56■□□□□ 0.56
RFTN1-201ENST00000334133 DPY19L3Q6ZPD9 716 aa18.56■□□□□ 0.56
RFTN1-201ENST00000334133 Q6ZVU0 165 aa18.56■□□□□ 0.56
RFTN1-201ENST00000334133 RGL4Q8IZJ4 473 aa18.56■□□□□ 0.56
RFTN1-201ENST00000334133 NCSTNQ92542 709 aa18.56■□□□□ 0.56
RFTN1-201ENST00000334133 ACDQ96AP0 544 aa18.56■□□□□ 0.56
RFTN1-201ENST00000334133 VOPP1Q96AW1 172 aa18.56■□□□□ 0.56
RFTN1-201ENST00000334133 AURKBQ96GD4 344 aaPredicted RBP18.56■□□□□ 0.56
RFTN1-201ENST00000334133 KIAA1522Q9P206 1035 aaPredicted RBP18.56■□□□□ 0.56
RFTN1-201ENST00000334133 UTS2RQ9UKP6 389 aa18.56■□□□□ 0.56
RFTN1-201ENST00000334133 COL4A6Q14031 1691 aa18.56■□□□□ 0.56
RFTN1-201ENST00000334133 RANBP2P49792 3224 aaKnown RBP18.55■□□□□ 0.56
RFTN1-201ENST00000334133 H3BNH8 94 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 LEFTY2O00292 366 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 ULK1O75385 1050 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 SNAP29O95721 258 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 OLFM2O95897 454 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 GLUD1P00367 558 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 VARSP26640 1264 aaKnown RBP18.55■□□□□ 0.56
RFTN1-201ENST00000334133 IST1P53990 364 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 PTSQ03393 145 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 ZXDCQ2QGD7 858 aaPredicted RBP18.55■□□□□ 0.56
RFTN1-201ENST00000334133 CNKSR3Q6P9H4 555 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 SERPINA13PQ6UXR4 307 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 VRK3Q8IV63 474 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 PHACTR4Q8IZ21 702 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 OR10Q1Q8NGQ4 319 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 OR10A6Q8NH74 314 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 FBXO30Q8TB52 745 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 GFM2Q969S9 779 aaKnown RBP18.55■□□□□ 0.56
RFTN1-201ENST00000334133 NSMCE2Q96MF7 247 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 ANKRD60Q9BZ19 345 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 RBM38Q9H0Z9 239 aaKnown RBP18.55■□□□□ 0.56
RFTN1-201ENST00000334133 MTG2Q9H4K7 406 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.55■□□□□ 0.56
RFTN1-201ENST00000334133 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.55■□□□□ 0.56
RFTN1-201ENST00000334133 LRG1P02750 347 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 GSNP06396 782 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 CCL5P13501 91 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 WEE1P30291 646 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 RFC2P35250 354 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 CCR2P41597 374 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 YAP1P46937 504 aaKnown RBP18.55■□□□□ 0.56
RFTN1-201ENST00000334133 MERTKQ12866 999 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 GRIK2Q13002 908 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 LSAMPQ13449 338 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 SUSD1Q6UWL2 747 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 CHST15Q7LFX5 561 aaPredicted RBP18.55■□□□□ 0.56
RFTN1-201ENST00000334133 OTOP2Q7RTS6 562 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 ITIH5Q86UX2 942 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 ANKRD46Q86W74 232 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 SORCS1Q8WY21 1168 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 SCAMP4Q969E2 229 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 PHF12Q96QT6 1004 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 YME1L1Q96TA2 773 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 HERC2P3Q9BVR0 1158 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 SLC6A13Q9NSD5 602 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 PNPLA3Q9NST1 481 aa18.55■□□□□ 0.56
RFTN1-201ENST00000334133 NEDD8-MDP1E9PL57 170 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 ENO2P09104 434 aaPredicted RBP18.54■□□□□ 0.56
RFTN1-201ENST00000334133 RPIAP49247 311 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 NR1H2P55055 460 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 MPPE1Q53F39 396 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 TTC33Q6PID6 262 aaPredicted RBP18.54■□□□□ 0.56
RFTN1-201ENST00000334133 BEND7Q8N7W2 519 aaPredicted RBP18.54■□□□□ 0.56
RFTN1-201ENST00000334133 TSPEARQ8WU66 669 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 ZFAND2BQ8WV99 257 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 ACTR8Q9H981 624 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 PAK6Q9NQU5 681 aaPredicted RBP18.54■□□□□ 0.56
RFTN1-201ENST00000334133 HSFX1Q9UBD0 423 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 LRATO95237 230 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 GPIP06744 558 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 C8AP07357 584 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 EPB42P16452 691 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 RPS3P23396 243 aaKnown RBP eCLIP18.54■□□□□ 0.56
RFTN1-201ENST00000334133 EEFSECP57772 596 aaKnown RBP18.54■□□□□ 0.56
RFTN1-201ENST00000334133 PTRH1Q86Y79 214 aaKnown RBP18.54■□□□□ 0.56
RFTN1-201ENST00000334133 NAT16Q8N8M0 369 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 ISG20Q96AZ6 181 aaKnown RBP18.54■□□□□ 0.56
RFTN1-201ENST00000334133 TCEAL4Q96EI5 215 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 CARS2Q9HA77 564 aaKnown RBP18.54■□□□□ 0.56
RFTN1-201ENST00000334133 TRBV5-4A0A0C4DH59 114 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 K7EPI3 171 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 LAPTM5Q13571 262 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 ATP6AP1Q15904 470 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 GRAMD4Q6IC98 578 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 DDX53Q86TM3 631 aaKnown RBP18.54■□□□□ 0.56
RFTN1-201ENST00000334133 ZNF689Q96CS4 500 aaPredicted RBP18.54■□□□□ 0.56
RFTN1-201ENST00000334133 COPS8Q99627 209 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 DPY30Q9C005 99 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 LTB4R2Q9NPC1 389 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 TMCO1Q9UM00 188 aa18.54■□□□□ 0.56
RFTN1-201ENST00000334133 NEUROG3Q9Y4Z2 214 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms