RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 CRY1Q16526 586 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 ZNF829Q3KNS6 432 aaPredicted RBP12.1□□□□□ -0.47
VPS33B-201ENST00000333371 ATXN7L2Q5T6C5 722 aaPredicted RBP12.1□□□□□ -0.47
VPS33B-201ENST00000333371 MILR1Q7Z6M3 343 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 ZDHHC13Q8IUH4 622 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 MSRB3Q8IXL7 192 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 MAGEH1Q9H213 219 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 OLA1Q9NTK5 396 aaKnown RBP12.1□□□□□ -0.47
VPS33B-201ENST00000333371 FAM118AQ9NWS6 357 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 SMPD4Q9NXE4 827 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 WARS2Q9UGM6 360 aaKnown RBP12.1□□□□□ -0.47
VPS33B-201ENST00000333371 RIMKLBQ9ULI2 386 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 ST14Q9Y5Y6 855 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 H0YAE9 185 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 K7EPI3 171 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 TAPBPO15533 448 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 SEC14L2O76054 403 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 GNRH1P01148 92 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 GSNP06396 782 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 ATF6P18850 670 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 KCNAB2Q13303 367 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 AQP6Q13520 282 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 BTG3Q14201 252 aaPredicted RBP12.1□□□□□ -0.47
VPS33B-201ENST00000333371 KIAA0040Q15053 153 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 PHKG1Q16816 387 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 DPY19L1Q2PZI1 675 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 SPATS1Q496A3 300 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 RTP2Q5QGT7 225 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 BROXQ5VW32 411 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 LAIR2Q6ISS4 152 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 PRSS55Q6UWB4 352 aaPredicted RBP12.1□□□□□ -0.47
VPS33B-201ENST00000333371 FAM151BQ6UXP7 276 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 TAS1R1Q7RTX1 841 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 EFL1Q7Z2Z2 1120 aaKnown RBP12.1□□□□□ -0.47
VPS33B-201ENST00000333371 THAP5Q7Z6K1 395 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 TRIM74Q86UV6 250 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 TRIM73Q86UV7 250 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 TMEM173Q86WV6 379 aaPredicted RBP12.1□□□□□ -0.47
VPS33B-201ENST00000333371 SPARTQ8N0X7 666 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 TTC30BQ8N4P2 665 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 BORCS5Q969J3 196 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 CIPCQ9C0C6 399 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 ELAC1Q9H777 363 aaKnown RBP12.1□□□□□ -0.47
VPS33B-201ENST00000333371 FBXO10Q9UK96 956 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 PCDHB9Q9Y5E1 797 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 PRSS21Q9Y6M0 314 aa12.1□□□□□ -0.47
VPS33B-201ENST00000333371 FFAR2O15552 330 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 ADAM12O43184 909 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 KDELR3O43731 214 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 NOL3O60936 208 aaKnown RBP12.09□□□□□ -0.47
VPS33B-201ENST00000333371 PRSS23O95084 383 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 CD160O95971 181 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 MYCP01106 439 aaPredicted RBP12.09□□□□□ -0.47
VPS33B-201ENST00000333371 FUCA1P04066 466 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 RHOCP08134 193 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 RPL17P18621 184 aaKnown RBP12.09□□□□□ -0.47
VPS33B-201ENST00000333371 MRPL19P49406 292 aaKnown RBP12.09□□□□□ -0.47
VPS33B-201ENST00000333371 ARF5P84085 180 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 SPCS2Q15005 226 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 RNF219Q5W0B1 726 aaPredicted RBP12.09□□□□□ -0.47
VPS33B-201ENST00000333371 GCNT7Q6ZNI0 430 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 SNX29P2Q8IUI4 249 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 SLC22A15Q8IZD6 547 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 C8orf59Q8N0T1 100 aaPredicted RBP12.09□□□□□ -0.47
VPS33B-201ENST00000333371 CHDHQ8NE62 594 aaPredicted RBP12.09□□□□□ -0.47
VPS33B-201ENST00000333371 SLC13A3Q8WWT9 602 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 GTF2H4Q92759 462 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 KCNJ9Q92806 393 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 ABCG8Q9H221 673 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 PAK1IP1Q9NWT1 392 aaPredicted RBP12.09□□□□□ -0.47
VPS33B-201ENST00000333371 COMMD8Q9NX08 183 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 KLQ9UEF7 1012 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 GNGT2O14610 69 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 ABCB7O75027 752 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 BCL10O95999 233 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 TTKP33981 857 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 SLC11A1P49279 550 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 RING1Q06587 406 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 CD47Q08722 323 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 FUT10Q6P4F1 479 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 SUSD1Q6UWL2 747 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 DCDC5Q6ZRR9 648 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 ANKRD46Q86W74 232 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 CENPSQ8N2Z9 138 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 LIX1Q8N485 282 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 ZNF548Q8NEK5 533 aaPredicted RBP12.09□□□□□ -0.47
VPS33B-201ENST00000333371 ITFG2Q969R8 447 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 SLC47A1Q96FL8 570 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 CASD1Q96PB1 797 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 FCF1Q9Y324 198 aaKnown RBP12.09□□□□□ -0.47
VPS33B-201ENST00000333371 CCL27Q9Y4X3 112 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 SLC30A1Q9Y6M5 507 aa12.09□□□□□ -0.47
VPS33B-201ENST00000333371 TRIM64BA6NI03 449 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 H0Y626 953 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 TOR1BO14657 336 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 XPNPEP2O43895 674 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 HS6ST1O60243 411 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 MITFO75030 526 aaPredicted RBP12.08□□□□□ -0.48
VPS33B-201ENST00000333371 ATP6V1G1O75348 118 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 TULP3O75386 442 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms