RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 SPOCK3Q9BQ16 436 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 TNKS2Q9H2K2 1166 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 SMURF2Q9HAU4 748 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 ZFYVE1Q9HBF4 777 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 MAGEE1Q9HCI5 957 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 CD320Q9NPF0 282 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 TUBA8Q9NY65 449 aaPredicted RBP13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 MBD1Q9UIS9 605 aaPredicted RBP13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 LOC730098B7Z3J9 87 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 AREL1O15033 823 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 MAGEB3O15480 346 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 GREM1O60565 184 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 OTCP00480 354 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 BPIP17213 487 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 GGT1P19440 569 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 HNF1BP35680 557 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 TAF12Q16514 161 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 INO80DQ53TQ3 878 aaPredicted RBP13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 TXNDC8Q6A555 127 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 STK32CQ86UX6 486 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 SLC22A15Q8IZD6 547 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 STK40Q8N2I9 435 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 AURKBQ96GD4 344 aaPredicted RBP13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 BDH2Q9BUT1 245 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 THUMPD3Q9BV44 507 aaKnown RBP13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 PFDN4Q9NQP4 134 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 GALNT8Q9NY28 637 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 TNPO3Q9Y5L0 923 aaKnown RBP13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 A0A0J9YVX5 310 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 KANSL1LA0AUZ9 987 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 RAD51BO15315 384 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 NOBOXO60393 691 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 C1QCP02747 245 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 ZNF7P17097 686 aaPredicted RBP13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 JAK1P23458 1154 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 ALDH7A1P49419 539 aaKnown RBP13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 ENTPD1P49961 510 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 NAA20P61599 178 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 ESRRGP62508 458 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 CHRNA6Q15825 494 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 ZXDCQ2QGD7 858 aaPredicted RBP13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 RFLNAQ6ZTI6 216 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 TMCO2Q7Z6W1 182 aaPredicted RBP13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 RGL4Q8IZJ4 473 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 LIX1Q8N485 282 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 ARL14EPQ8N8R7 260 aaPredicted RBP13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 FAM81AQ8TBF8 368 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 SLC13A3Q8WWT9 602 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 AUTS2Q8WXX7 1259 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 RHBDF1Q96CC6 855 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 HSPBAP1Q96EW2 488 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 RETREG1Q9H6L5 497 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 IFT80Q9P2H3 777 aaPredicted RBP13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 MAGEL2Q9UJ55 1249 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 AOC2O75106 756 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 NPPAP01160 153 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 ALPLP05186 524 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 ANXA6P08133 673 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 MTHFRP42898 656 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 PHC1P78364 1004 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 DCTN2Q13561 401 aaKnown RBP13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 CDKN3Q16667 212 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 FGD3Q5JSP0 725 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 KIAA1841Q6NSI8 718 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 PAF1Q8N7H5 531 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 ZNF461Q8TAF7 563 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 OSCP1Q8WVF1 389 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 YIPF1Q9Y548 306 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 MYOFQ9NZM1 2061 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 A0A1W2PPW3 197 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 H3BMQ9 156 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 EFEMP2O95967 443 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 GLUD1P00367 558 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 MYCP01106 439 aaPredicted RBP13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 S100BP04271 92 aaPredicted RBP13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 RANBP1P43487 201 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 CCL23P55773 120 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 CDH18Q13634 790 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 ELMSAN1Q6PJG2 1045 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.16□□□□□ -0.31e-7■■■■□ 24.1
TUBA1B-201ENST00000332858 NAT16Q8N8M0 369 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 OR2T12Q8NG77 320 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 CD99L2Q8TCZ2 262 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 COG8Q96MW5 612 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 CD244Q9BZW8 370 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 WWOXQ9NZC7 414 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 DNMT3BQ9UBC3 853 aaKnown RBP13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 SRRDQ9UH36 339 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 ZNF490Q9ULM2 529 aaPredicted RBP13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 PCDHB1Q9Y5F3 818 aa13.16□□□□□ -0.3
TUBA1B-201ENST00000332858 SEC22BO75396 215 aa13.15□□□□□ -0.3
TUBA1B-201ENST00000332858 PRSS23O95084 383 aa13.15□□□□□ -0.3
TUBA1B-201ENST00000332858 KCNH1O95259 989 aa13.15□□□□□ -0.3
TUBA1B-201ENST00000332858 TRBC1P01850 177 aa13.15□□□□□ -0.3
TUBA1B-201ENST00000332858 RAP2AP10114 183 aa13.15□□□□□ -0.3
TUBA1B-201ENST00000332858 C7P10643 843 aa13.15□□□□□ -0.3
TUBA1B-201ENST00000332858 CRY1Q16526 586 aa13.15□□□□□ -0.3
TUBA1B-201ENST00000332858 GPRC6AQ5T6X5 926 aa13.15□□□□□ -0.3
TUBA1B-201ENST00000332858 DNAJB7Q7Z6W7 309 aaPredicted RBP13.15□□□□□ -0.3
TUBA1B-201ENST00000332858 CLEC4FQ8N1N0 589 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms