RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 GEMP55040 296 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 CDKN2DP55273 166 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 GALNT3Q14435 633 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 LYPD8Q6UX82 237 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 GALNT7Q86SF2 657 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 RHNO1Q9BSD3 238 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 FSD1LQ9BXM9 530 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 ACOXLQ9NUZ1 547 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 CD1DP15813 335 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 SIM2Q14190 667 aaPredicted RBP23.92■■□□□ 1.42
SOX1-201ENST00000330949 LAIR1Q6GTX8 287 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 IDO2Q6ZQW0 420 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 RYBPQ8N488 228 aaPredicted RBP23.92■■□□□ 1.42
SOX1-201ENST00000330949 NUSAP1Q9BXS6 441 aaKnown RBP23.92■■□□□ 1.42
SOX1-201ENST00000330949 RIBC2Q9H4K1 309 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 TOR4AQ9NXH8 423 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 UTS2RQ9UKP6 389 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 GMPPBQ9Y5P6 360 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 LYVE1Q9Y5Y7 322 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 COL1A2P08123 1366 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 ADM5C9JUS6 153 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 TGFB3P10600 412 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 ZNF33AQ06730 810 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 SYPL2Q5VXT5 272 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 NRARPQ7Z6K4 114 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 ADAMTSL2Q86TH1 951 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 C18orf25Q96B23 403 aaPredicted RBP23.92■■□□□ 1.42
SOX1-201ENST00000330949 AASSQ9UDR5 926 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 ARNTLO00327 626 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 AP3D1O14617 1153 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 SCNN1GP51170 649 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.92■■□□□ 1.42
SOX1-201ENST00000330949 GALNT5Q7Z7M9 940 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 OR52E4Q8NGH9 312 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 FAM162AQ96A26 154 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 RHBDF1Q96CC6 855 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 C12orf10Q9HB07 376 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 U3KQV3 271 aa23.92■■□□□ 1.42
SOX1-201ENST00000330949 CDK2AP1O14519 115 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 MITFO75030 526 aaPredicted RBP23.91■■□□□ 1.42
SOX1-201ENST00000330949 SLC4A1P02730 911 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 SERPINF2P08697 491 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 HOXB6P17509 224 aaKnown RBP23.91■■□□□ 1.42
SOX1-201ENST00000330949 PFKLP17858 780 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 MSH3P20585 1137 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 GADD45AP24522 165 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 FMO4P31512 558 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 ZNF135P52742 658 aaPredicted RBP23.91■■□□□ 1.42
SOX1-201ENST00000330949 PWP1Q13610 501 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 PLA2G4EQ3MJ16 856 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 XKR7Q5GH72 579 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 FAM126BQ8IXS8 530 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 PPP1R2P1Q96PQ5 205 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 MAGIXQ9H6Y5 334 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 ATP13A2Q9NQ11 1180 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 WDR70Q9NW82 654 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 PKP3Q9Y446 797 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 EFNA1P20827 205 aaPredicted RBP23.91■■□□□ 1.42
SOX1-201ENST00000330949 ADRA1AP35348 466 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 MAGEA11P43364 429 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 BNC1Q01954 994 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 GBX1Q14549 363 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 CILP2Q8IUL8 1156 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 OR5H6Q8NGV6 325 aa23.91■■□□□ 1.42
SOX1-201ENST00000330949 RPLP0P05388 317 aaKnown RBP23.9■■□□□ 1.42
SOX1-201ENST00000330949 IL7P13232 177 aa23.9■■□□□ 1.42
SOX1-201ENST00000330949 YWHAHQ04917 246 aaPredicted RBP23.9■■□□□ 1.42
SOX1-201ENST00000330949 SMN1Q16637 294 aaKnown RBP23.9■■□□□ 1.42
SOX1-201ENST00000330949 SYCE2Q6PIF2 218 aa23.9■■□□□ 1.42
SOX1-201ENST00000330949 PIM3Q86V86 326 aa23.9■■□□□ 1.42
SOX1-201ENST00000330949 ZNF548Q8NEK5 533 aaPredicted RBP23.9■■□□□ 1.42
SOX1-201ENST00000330949 SLC2A14Q8TDB8 520 aa23.9■■□□□ 1.42
SOX1-201ENST00000330949 ZNF599Q96NL3 588 aa23.9■■□□□ 1.42
SOX1-201ENST00000330949 VPS35Q96QK1 796 aa23.9■■□□□ 1.42
SOX1-201ENST00000330949 PLEKHA5Q9HAU0 1116 aa23.9■■□□□ 1.42
SOX1-201ENST00000330949 GLOD4Q9HC38 313 aa23.9■■□□□ 1.42
SOX1-201ENST00000330949 SCELO95171 688 aa23.9■■□□□ 1.42
SOX1-201ENST00000330949 CYP4B1P13584 511 aa23.9■■□□□ 1.42
SOX1-201ENST00000330949 MTHFD2P13995 350 aa23.9■■□□□ 1.42
SOX1-201ENST00000330949 Q5BKY6 102 aa23.9■■□□□ 1.42
SOX1-201ENST00000330949 AHSA2Q719I0 299 aa23.9■■□□□ 1.42
SOX1-201ENST00000330949 DPP9Q86TI2 863 aa23.9■■□□□ 1.42
SOX1-201ENST00000330949 SLC51BQ86UW2 128 aa23.9■■□□□ 1.42
SOX1-201ENST00000330949 RHEBL1Q8TAI7 183 aa23.9■■□□□ 1.42
SOX1-201ENST00000330949 PABPC5Q96DU9 382 aaKnown RBP23.9■■□□□ 1.42
SOX1-201ENST00000330949 MAP6Q96JE9 813 aa23.9■■□□□ 1.42
SOX1-201ENST00000330949 SIGLEC11Q96RL6 698 aa23.9■■□□□ 1.42
SOX1-201ENST00000330949 SEMA4BQ9NPR2 832 aaPredicted RBP23.9■■□□□ 1.42
SOX1-201ENST00000330949 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.9■■□□□ 1.42
SOX1-201ENST00000330949 CSADQ9Y600 493 aa23.9■■□□□ 1.42
SOX1-201ENST00000330949 H3BQ06 376 aaPredicted RBP23.89■■□□□ 1.42
SOX1-201ENST00000330949 UGT2B17O75795 530 aa23.89■■□□□ 1.42
SOX1-201ENST00000330949 CHRNA4P43681 627 aa23.89■■□□□ 1.42
SOX1-201ENST00000330949 UGT2B15P54855 530 aa23.89■■□□□ 1.42
SOX1-201ENST00000330949 KCTD2Q14681 263 aa23.89■■□□□ 1.42
SOX1-201ENST00000330949 MAD2L1BPQ15013 274 aaPredicted RBP23.89■■□□□ 1.42
SOX1-201ENST00000330949 FAM187BQ17R55 369 aa23.89■■□□□ 1.42
SOX1-201ENST00000330949 TWF2Q6IBS0 349 aaKnown RBP23.89■■□□□ 1.42
SOX1-201ENST00000330949 SHQ1Q6PI26 577 aaKnown RBP23.89■■□□□ 1.42
SOX1-201ENST00000330949 CRYBG2Q8N1P7 616 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms