RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 MISP3Q96FF7 219 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 FCRL3Q96P31 734 aaPredicted RBP6.22□□□□□ -1.41
SMG1-201ENST00000330588 SLC38A3Q99624 504 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 HEMGNQ9BXL5 484 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 ASPSCR1Q9BZE9 553 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 OR2AG1Q9H205 316 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 LRRC40Q9H9A6 602 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 SEMA5BQ9P283 1151 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 CPNE7Q9UBL6 633 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 TBC1D29Q9UFV1 150 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 TMPRSS11EQ9UL52 423 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 SHOC2Q9UQ13 582 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.22□□□□□ -1.41
SMG1-201ENST00000330588 RP1P56715 2156 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 LAMA1P25391 3075 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 KNTC1P50748 2209 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 ASXL3Q9C0F0 2248 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 IGLV3-16A0A075B6K0 115 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 TRBV5-4A0A0C4DH59 114 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 C17orf113A0A1B0GUU1 675 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 QSOX1O00391 747 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 AURKAO14965 403 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 KCNN4O15554 427 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 AP2A1O95782 977 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 PIRTP0C851 137 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 RALBP11234 206 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 ACP5P13686 325 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 ITPKBP27987 946 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 PSMB4P28070 264 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 CSF2RBP32927 897 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 CSTF2P33240 577 aaKnown RBP eCLIP6.21□□□□□ -1.42
SMG1-201ENST00000330588 FDFT1P37268 417 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 HALP42357 657 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 ZNF140P52738 457 aaPredicted RBP6.21□□□□□ -1.42
SMG1-201ENST00000330588 OR1D5P58170 312 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 CCDC173Q0VFZ6 552 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 ZKSCAN8Q15776 578 aaPredicted RBP6.21□□□□□ -1.42
SMG1-201ENST00000330588 LONRF2Q1L5Z9 754 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 INSCQ1MX18 579 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 CYP27C1Q4G0S4 372 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 SEL1L2Q5TEA6 688 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 ALS2CLQ60I27 953 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 DENND5AQ6IQ26 1287 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 C19orf48Q6RUI8 117 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 ARHGEF18Q6ZSZ5 1173 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 TMEM26Q6ZUK4 368 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 MARK2Q7KZI7 788 aaKnown RBP6.21□□□□□ -1.42
SMG1-201ENST00000330588 TMPRSS9Q7Z410 1059 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 PRSS42Q7Z5A4 293 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 ZNF547Q8IVP9 402 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 BMPERQ8N8U9 685 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 Q8N9G6 341 aaPredicted RBP6.21□□□□□ -1.42
SMG1-201ENST00000330588 PATE1Q8WXA2 126 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 GATAD2BQ8WXI9 593 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 AHCYL2Q96HN2 611 aaKnown RBP6.21□□□□□ -1.42
SMG1-201ENST00000330588 CCDC74BQ96LY2 380 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 TTC25Q96NG3 672 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 FCRL4Q96PJ5 515 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 CCNL2Q96S94 520 aaPredicted RBP6.21□□□□□ -1.42
SMG1-201ENST00000330588 TBL1YQ9BQ87 522 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 NUDT22Q9BRQ3 303 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 FICDQ9BVA6 458 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 TRIT1Q9H3H1 467 aaKnown RBP6.21□□□□□ -1.42
SMG1-201ENST00000330588 SYNDIG1Q9H7V2 258 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 FBXO8Q9NRD0 319 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 KLC4Q9NSK0 619 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 ACSL5Q9ULC5 683 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 TFR2Q9UP52 801 aa6.21□□□□□ -1.42
SMG1-201ENST00000330588 PCYT1BQ9Y5K3 369 aaPredicted RBP6.21□□□□□ -1.42
SMG1-201ENST00000330588 MACROD2A1Z1Q3 448 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 GOLGA6L3A6NEY3 463 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 MGAT4DA6NG13 374 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 F8W8V4 182 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 STMND1H3BQB6 276 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 AP3B1O00203 1094 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 SRP72O76094 671 aaKnown RBP6.2□□□□□ -1.42
SMG1-201ENST00000330588 SUN1O94901 812 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 AP2A2O94973 939 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 PRAMEF1O95521 474 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 AGTP01019 485 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 CCDC175P0C221 793 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 ITGALP20701 1170 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 NDUFS1P28331 727 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 PRLHRP49683 370 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 XIAPP98170 497 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 MC2RQ01718 297 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 CFHR1Q03591 330 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 RPA4Q13156 261 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 NFATC2Q13469 925 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 C16orf72Q14CZ0 275 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 OASLQ15646 514 aaKnown RBP6.2□□□□□ -1.42
SMG1-201ENST00000330588 CHRNA6Q15825 494 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 SOWAHCQ53LP3 525 aaPredicted RBP6.2□□□□□ -1.42
SMG1-201ENST00000330588 PHF19Q5T6S3 580 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 GPRC6AQ5T6X5 926 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 METRNLQ641Q3 311 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 KLHL35Q6PF15 583 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 LRFN4Q6PJG9 635 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 CEACAM20Q6UY09 585 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 KDELC2Q7Z4H8 507 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms