RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 SMAD6O43541 496 aaKnown RBP13.8□□□□□ -0.2
ATP2C1-201ENST00000328560 ULK1O75385 1050 aa13.8□□□□□ -0.2
ATP2C1-201ENST00000328560 CST1P01037 141 aa13.8□□□□□ -0.2
ATP2C1-201ENST00000328560 TFPTP0C1Z6 253 aa13.8□□□□□ -0.2
ATP2C1-201ENST00000328560 SHMT2P34897 504 aa13.8□□□□□ -0.2
ATP2C1-201ENST00000328560 PWP1Q13610 501 aa13.8□□□□□ -0.2
ATP2C1-201ENST00000328560 WFDC5Q8TCV5 224 aa13.8□□□□□ -0.2
ATP2C1-201ENST00000328560 GFM2Q969S9 779 aaKnown RBP13.8□□□□□ -0.2
ATP2C1-201ENST00000328560 SLC22A12Q96S37 553 aa13.8□□□□□ -0.2
ATP2C1-201ENST00000328560 CARS2Q9HA77 564 aaKnown RBP13.8□□□□□ -0.2
ATP2C1-201ENST00000328560 NTN4Q9HB63 628 aa13.8□□□□□ -0.2
ATP2C1-201ENST00000328560 LHX3Q9UBR4 397 aa13.8□□□□□ -0.2
ATP2C1-201ENST00000328560 WARS2Q9UGM6 360 aaKnown RBP13.8□□□□□ -0.2
ATP2C1-201ENST00000328560 PCDHB3Q9Y5E6 796 aa13.8□□□□□ -0.2
ATP2C1-201ENST00000328560 PCDHGA11Q9Y5H2 935 aa13.8□□□□□ -0.2
ATP2C1-201ENST00000328560 PATJQ8NI35 1801 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 LOC730098B7Z3J9 87 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 THRBP10828 461 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 MAP4P27816 1152 aaKnown RBP13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 EMP3P54852 163 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 TRAF3Q13114 568 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 ARHGEF6Q15052 776 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 FAM117BQ6P1L5 589 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 SCLYQ96I15 445 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 FEM1AQ9BSK4 669 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 TUBA8Q9NY65 449 aaPredicted RBP13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 INVSQ9Y283 1065 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 TDRKHQ9Y2W6 561 aaKnown RBP13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 G3V2T6 193 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 RAP2AP10114 183 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 BNIP3Q12983 259 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 DAG1Q14118 895 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 C5orf22Q49AR2 442 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 CCNYL2Q5T2Q4 361 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 PPP3R2Q96LZ3 170 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 ZNF583Q96ND8 569 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 OR52E6Q96RD3 313 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 OSBPL6Q9BZF3 934 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 CCDC90BQ9GZT6 254 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 P2RY12Q9H244 342 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 HEBP1Q9NRV9 189 aa13.79□□□□□ -0.2
ATP2C1-201ENST00000328560 H3BMQ9 156 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 TAPBPO15533 448 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 RGS14O43566 566 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 PRKD3O94806 890 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 LRATO95237 230 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 ITGALP20701 1170 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 POLR2IP36954 125 aaKnown RBP13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 CRY1Q16526 586 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 ANKDD1AQ495B1 522 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 ADGRG2Q8IZP9 1017 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 APCDD1Q8J025 514 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 TMEM169Q96HH4 297 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 COG8Q96MW5 612 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 HIPK3Q9H422 1215 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 TOR3AQ9H497 397 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 ACTR8Q9H981 624 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 TLR9Q9NR96 1032 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 PTGES3LE9PB15 166 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 CD247P20963 164 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 HMGCLP35914 325 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 NEK2P51955 445 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 CYP4F3Q08477 520 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 PCBP2Q15366 365 aaKnown RBP eCLIP13.78□□□□□ -0.22e-8■■■■■ 32.5
ATP2C1-201ENST00000328560 CHRNA6Q15825 494 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 TPGS1Q6ZTW0 290 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 ARL14EPQ8N8R7 260 aaPredicted RBP13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 BPIFB1Q8TDL5 484 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 PLD4Q96BZ4 506 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 CCDC138Q96M89 665 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 TTLL2Q9BWV7 592 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 B3GALT4O96024 378 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 HMGA1P17096 107 aaKnown RBP13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 BCL2L1Q07817 233 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 LRRC73Q5JTD7 316 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 CACHD1Q5VU97 1274 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 SLC22A15Q8IZD6 547 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 RGL4Q8IZJ4 473 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 RBFAQ8N0V3 343 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 DPP10Q8N608 796 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 PAPD5Q8NDF8 572 aaKnown RBP13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 CDC26Q8NHZ8 85 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 TSSK3Q96PN8 268 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 DGCR6LQ9BY27 220 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 GPBP1L1Q9HC44 474 aaPredicted RBP13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 IL26Q9NPH9 171 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 PCDHB1Q9Y5F3 818 aa13.78□□□□□ -0.2
ATP2C1-201ENST00000328560 NUP214P35658 2090 aaPredicted RBP13.77□□□□□ -0.2
ATP2C1-201ENST00000328560 KRT87PA6NCN2 255 aa13.77□□□□□ -0.2
ATP2C1-201ENST00000328560 HS6ST1O60243 411 aa13.77□□□□□ -0.2
ATP2C1-201ENST00000328560 TBC1D4O60343 1298 aa13.77□□□□□ -0.2
ATP2C1-201ENST00000328560 ZNF182P17025 639 aaPredicted RBP13.77□□□□□ -0.2
ATP2C1-201ENST00000328560 GGT1P19440 569 aa13.77□□□□□ -0.2
ATP2C1-201ENST00000328560 DGKAP23743 735 aa13.77□□□□□ -0.2
ATP2C1-201ENST00000328560 GNPDA1P46926 289 aa13.77□□□□□ -0.2
ATP2C1-201ENST00000328560 ALDH3A2P51648 485 aa13.77□□□□□ -0.2
ATP2C1-201ENST00000328560 NAA20P61599 178 aa13.77□□□□□ -0.2
ATP2C1-201ENST00000328560 ADARB1P78563 741 aaKnown RBP13.77□□□□□ -0.2
ATP2C1-201ENST00000328560 NKG7Q16617 165 aa13.77□□□□□ -0.2
ATP2C1-201ENST00000328560 PGS1Q32NB8 556 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms