RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 ABCG1P45844 678 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 GHRHRQ02643 423 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 ZNF783Q6ZMS7 281 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 PARGQ86W56 976 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 TRPM4Q8TD43 1214 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 ALG3Q92685 438 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 NXNL1Q96CM4 212 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 FAM210AQ96ND0 272 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.12□□□□□ -0.31
TRAK1-201ENST00000327628 SP140LQ9H930 580 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 C9J4A7 227 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 NME6O75414 186 aaPredicted RBP13.12□□□□□ -0.31
TRAK1-201ENST00000327628 ITGA10O75578 1167 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 HRH2P25021 359 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 LILRA4P59901 499 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 GK5Q6ZS86 529 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 IFNL1Q8IU54 200 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 COX18Q8N8Q8 333 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 FAM47BQ8NA70 645 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 EXOC2Q96KP1 924 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 C12orf66Q96MD2 445 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 TRNT1Q96Q11 434 aaKnown RBP13.12□□□□□ -0.31
TRAK1-201ENST00000327628 GMEB1Q9Y692 573 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 EPHB6O15197 1021 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 AP2A2O94973 939 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 ZNF12P17014 697 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 IL18R1Q13478 541 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 TMEM164Q5U3C3 297 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 CNKSR3Q6P9H4 555 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 CMC1Q7Z7K0 106 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 P2RY8Q86VZ1 359 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 AMZ2Q86W34 360 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 CACUL1Q86Y37 369 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 RAB2BQ8WUD1 216 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 TRIB3Q96RU7 358 aa13.12□□□□□ -0.31
TRAK1-201ENST00000327628 C19orf25Q9UFG5 118 aaPredicted RBP13.12□□□□□ -0.31
TRAK1-201ENST00000327628 EDDM13A0A1B0GTR0 161 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 OR14I1A6ND48 311 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 CXCR6O00574 342 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 CCL16O15467 120 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 RPLP0P05388 317 aaKnown RBP13.11□□□□□ -0.31
TRAK1-201ENST00000327628 CYP4F3Q08477 520 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 FIP1L1Q6UN15 594 aaKnown RBP13.11□□□□□ -0.31
TRAK1-201ENST00000327628 LRRC57Q8N9N7 239 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 KREMEN2Q8NCW0 462 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 OTUB2Q96DC9 234 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 HMCESQ96FZ2 354 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 CMTM7Q96FZ5 175 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 NPAS2Q99743 824 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 IGKV6D-41A0A0C4DH26 115 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 OR1F1O43749 312 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 ORC5O43913 435 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 PGM3O95394 542 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 CLCN7P51798 805 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 SLC5A9Q2M3M2 681 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 DDI2Q5TDH0 399 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 CCDC54Q8NEL0 328 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 IFT46Q9NQC8 304 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 ETAA1Q9NY74 926 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 H0YGN5 161 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 WNT9AO14904 365 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 VEGFDO43915 354 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 NOL4O94818 638 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 DSC2Q02487 901 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 SNTA1Q13424 505 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 IL18Q14116 193 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 RUNDC3AQ59EK9 446 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 SH3D19Q5HYK7 790 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 HGSNATQ68CP4 663 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 TMEM145Q8NBT3 493 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 RGMAQ96B86 450 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 KAT8Q9H7Z6 458 aaKnown RBP13.11□□□□□ -0.31
TRAK1-201ENST00000327628 MKS1Q9NXB0 559 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 SLC17A7Q9P2U7 560 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 ZNF221Q9UK13 617 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 CPQQ9Y646 472 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 RLN2P04090 185 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 CDH1P12830 882 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 CSNK2A2P19784 350 aaPredicted RBP13.11□□□□□ -0.31
TRAK1-201ENST00000327628 RBM34P42696 430 aaKnown RBP13.11□□□□□ -0.31
TRAK1-201ENST00000327628 ATXN1P54253 815 aaKnown RBP13.11□□□□□ -0.31
TRAK1-201ENST00000327628 RAPSNQ13702 412 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 MAPK14Q16539 360 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 CFAP206Q8IYR0 622 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 LIX1Q8N485 282 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 ANKFN1Q8N957 763 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.11□□□□□ -0.31
TRAK1-201ENST00000327628 OR5T3Q8NGG3 340 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 SLC9A6Q92581 669 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 PCED1BQ96HM7 432 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 TRMT13Q9NUP7 481 aaKnown RBP13.11□□□□□ -0.31
TRAK1-201ENST00000327628 P2RX2Q9UBL9 471 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 PCDHGB6Q9Y5F9 930 aa13.11□□□□□ -0.31
TRAK1-201ENST00000327628 OAS3Q9Y6K5 1087 aaKnown RBP13.11□□□□□ -0.31
TRAK1-201ENST00000327628 C9P02748 559 aa13.1□□□□□ -0.31
TRAK1-201ENST00000327628 TUBA3CQ13748 450 aa13.1□□□□□ -0.31
TRAK1-201ENST00000327628 PDE12Q6L8Q7 609 aaKnown RBP13.1□□□□□ -0.31
TRAK1-201ENST00000327628 TMEM220Q6QAJ8 160 aa13.1□□□□□ -0.31
TRAK1-201ENST00000327628 AMIGO2Q86SJ2 522 aa13.1□□□□□ -0.31
TRAK1-201ENST00000327628 ZNF554Q86TJ5 538 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms