RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 IL12BP29460 328 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 ADAM17P78536 824 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 COPS4Q9BT78 406 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 LGR4Q9BXB1 951 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 PHF24Q9UPV7 400 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 FKTNO75072 461 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 UBXN7O94888 489 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 RASGRP1O95267 797 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 CD48P09326 243 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 SELPP16109 830 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 ARCN1P48444 511 aaKnown RBP20.72■□□□□ 0.91
RNF40-201ENST00000324685 HERC3Q15034 1050 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 KHDC1Q4VXA5 237 aaKnown RBP20.72■□□□□ 0.91
RNF40-201ENST00000324685 LINGO4Q6UY18 593 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 ATAD1Q8NBU5 361 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 OR10H4Q8NGA5 316 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 COQ10BQ9H8M1 238 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 FKBP7Q9Y680 259 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 MAP2P11137 1827 aaKnown RBP20.71■□□□□ 0.91
RNF40-201ENST00000324685 ZNF823P16415 610 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 PDX1P52945 283 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 ADGRG6Q86SQ4 1221 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 SATL1Q86VE3 508 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 TP53INP1Q96A56 240 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 FAM84AQ96KN4 292 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 HEPHQ9BQS7 1158 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 STXBP5LQ9Y2K9 1186 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 CCL16O15467 120 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 PRAMEF12O95522 483 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 YAP1P46937 504 aaKnown RBP20.71■□□□□ 0.91
RNF40-201ENST00000324685 HNRNPDQ14103 355 aaKnown RBP20.71■□□□□ 0.91
RNF40-201ENST00000324685 RALGPS1Q5JS13 557 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 KIAA0930Q6ICG6 404 aaPredicted RBP20.71■□□□□ 0.91
RNF40-201ENST00000324685 TFB2MQ9H5Q4 396 aaKnown RBP20.71■□□□□ 0.91
RNF40-201ENST00000324685 THUMPD1Q9NXG2 353 aaKnown RBP20.71■□□□□ 0.91
RNF40-201ENST00000324685 C2CD4BA6NLJ0 364 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 CPSF4LA6NMK7 179 aaKnown RBP20.71■□□□□ 0.91
RNF40-201ENST00000324685 MID1O15344 667 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 GMFGO60234 142 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 CD2P06729 351 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 EPHX1P07099 455 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 TSPAN5P62079 268 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 ANKRD46Q86W74 232 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 MPP5Q8N3R9 675 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 SNX27Q96L92 541 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 C12orf4Q9NQ89 552 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 GTF2IRD1Q9UHL9 959 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 GRIN2DO15399 1336 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 CYB5AP00167 134 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 NSG1P42857 185 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 RAB15P59190 212 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 SMU1Q2TAY7 513 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 TREML2Q5T2D2 321 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 PTF1AQ7RTS3 328 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 RBM18Q96H35 190 aaKnown RBP20.71■□□□□ 0.91
RNF40-201ENST00000324685 EBF3Q9H4W6 596 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 FBXW11Q9UKB1 542 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 POMPQ9Y244 141 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 MED31Q9Y3C7 131 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 PCDHA2Q9Y5H9 948 aa20.71■□□□□ 0.91
RNF40-201ENST00000324685 FFAR2O15552 330 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 TLX3O43711 291 aaPredicted RBP20.7■□□□□ 0.9
RNF40-201ENST00000324685 B3GALT2O43825 422 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 ALPPP05187 535 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 DBIP07108 87 aaKnown RBP20.7■□□□□ 0.9
RNF40-201ENST00000324685 XKR4Q5GH76 650 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 RBM48Q5RL73 367 aaKnown RBP20.7■□□□□ 0.9
RNF40-201ENST00000324685 UBAP2Q5T6F2 1119 aaKnown RBP20.7■□□□□ 0.9
RNF40-201ENST00000324685 CEP68Q76N32 757 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 LINGO2Q7L985 606 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 ZBED6CLQ96FA7 236 aaPredicted RBP20.7■□□□□ 0.9
RNF40-201ENST00000324685 PIWIL1Q96J94 861 aaKnown RBP20.7■□□□□ 0.9
RNF40-201ENST00000324685 AASSQ9UDR5 926 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 ALAS2P22557 587 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 NR4A1P22736 598 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 VARSP26640 1264 aaKnown RBP20.7■□□□□ 0.9
RNF40-201ENST00000324685 LCN9Q8WX39 176 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 IFT27Q9BW83 186 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 FKBPLQ9UIM3 349 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 FUT2Q10981 343 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 UBXN11Q5T124 520 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 IDNKQ5T6J7 187 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 OR2L3Q8NG85 312 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 GFM1Q96RP9 751 aaKnown RBP20.7■□□□□ 0.9
RNF40-201ENST00000324685 CDH7Q9ULB5 785 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 ITIH1P19827 911 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 CLCN4P51793 760 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 ADAM8P78325 824 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 ILF3Q12906 894 aaKnown RBP eCLIP20.7■□□□□ 0.9
RNF40-201ENST00000324685 ALKBH2Q6NS38 261 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 C2orf15Q8WU43 125 aaKnown RBP20.7■□□□□ 0.9
RNF40-201ENST00000324685 RAB11FIP5Q9BXF6 653 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 RC3H2Q9HBD1 1191 aaKnown RBP20.7■□□□□ 0.9
RNF40-201ENST00000324685 CIDEBQ9UHD4 219 aa20.7■□□□□ 0.9
RNF40-201ENST00000324685 CDH1P12830 882 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 ANXA8P13928 327 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 RPL19P84098 196 aaKnown RBP20.69■□□□□ 0.9
RNF40-201ENST00000324685 SLC9B1Q4ZJI4 515 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 RBM23Q86U06 439 aaKnown RBP20.69■□□□□ 0.9
RNF40-201ENST00000324685 DUSP26Q9BV47 211 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms