RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 NCEH1Q6PIU2 408 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 TPRG1Q6ZUI0 275 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 REM2Q8IYK8 340 aaPredicted RBP13.36□□□□□ -0.27
SRRM1-201ENST00000323848 JPH3Q8WXH2 748 aaPredicted RBP13.36□□□□□ -0.27
SRRM1-201ENST00000323848 IL17FQ96PD4 163 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 SPHK2Q9NRA0 654 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 IL17CQ9P0M4 197 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 ANAPC2Q9UJX6 822 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 PCDHB1Q9Y5F3 818 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 WDR87Q6ZQQ6 2873 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 KCNH1O95259 989 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 EPORP19235 508 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 HMGCLP35914 325 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 CDH15P55291 814 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 NFKB2Q00653 900 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 RFTN1Q14699 578 aaPredicted RBP13.36□□□□□ -0.27
SRRM1-201ENST00000323848 HIST2H2ACQ16777 129 aaPredicted RBP13.36□□□□□ -0.27
SRRM1-201ENST00000323848 IER5LQ5T953 404 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 HIST2H2AA3Q6FI13 130 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 SDE2Q6IQ49 451 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 CYP20A1Q6UW02 462 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 LIMS2Q7Z4I7 341 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 GPR180Q86V85 440 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 NXPE1Q8N323 547 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 LILRA3Q8N6C8 439 aaPredicted RBP13.36□□□□□ -0.27
SRRM1-201ENST00000323848 VPS37AQ8NEZ2 397 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 KXD1Q9BQD3 176 aa13.36□□□□□ -0.27
SRRM1-201ENST00000323848 CACNA1CQ13936 2221 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 TSPAN6O43657 245 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 ERAL1O75616 437 aaKnown RBP13.35□□□□□ -0.27
SRRM1-201ENST00000323848 PAPSS2O95340 614 aaPredicted RBP13.35□□□□□ -0.27
SRRM1-201ENST00000323848 CLDN9O95484 217 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 LYNP07948 512 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 FAM58BPP0C7Q3 252 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 FDXRP22570 491 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 CCT8P50990 548 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 PPIGQ13427 754 aaKnown RBP eCLIP13.35□□□□□ -0.275e-9■■□□□ 12.2
SRRM1-201ENST00000323848 IRGCQ6NXR0 463 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 LETMD1Q6P1Q0 360 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 CRTC1Q6UUV9 634 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 CATSPER1Q8NEC5 780 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 RELTQ969Z4 430 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 VN1R3Q9BXE9 311 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 EXD2Q9NVH0 621 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 THG1LQ9NWX6 298 aaKnown RBP13.35□□□□□ -0.27
SRRM1-201ENST00000323848 RAPGEFL1Q9UHV5 662 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 PRPF19Q9UMS4 504 aaKnown RBP13.35□□□□□ -0.27
SRRM1-201ENST00000323848 C15orf38-AP3S2A0A0A6YYH1 394 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 TRIM43BA6NCK2 446 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 ARPINQ7Z6K5 226 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 OR2T12Q8NG77 320 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 TRIM43Q96BQ3 446 aaPredicted RBP13.35□□□□□ -0.27
SRRM1-201ENST00000323848 C1QTNF1Q9BXJ1 281 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 MKS1Q9NXB0 559 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 ADGRE2Q9UHX3 823 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 ARID2Q68CP9 1835 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 HTTP42858 3142 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 C5orf58C9J3I9 102 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 NOBOXO60393 691 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 ERVPABLB-1P60509 514 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 CYP27C1Q4G0S4 372 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 C6orf136Q5SQH8 315 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 TXNDC11Q6PKC3 985 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 ZC3H7AQ8IWR0 971 aaKnown RBP13.35□□□□□ -0.27
SRRM1-201ENST00000323848 KBTBD2Q8IY47 623 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 ZNF614Q8N883 585 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 OR52J3Q8NH60 311 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 B4GALNT2Q8NHY0 566 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 CD200R1Q8TD46 325 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 CWH43Q9H720 699 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 SNX6Q9UNH7 406 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 TBC1D30Q9Y2I9 924 aa13.35□□□□□ -0.27
SRRM1-201ENST00000323848 SLC9A3R1O14745 358 aaPredicted RBP13.34□□□□□ -0.27
SRRM1-201ENST00000323848 KPNA5O15131 536 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 MAP3K13O43283 966 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 ADH1CP00326 375 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 TIMP1P01033 207 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 MAPK9P45984 424 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 RFTN2Q52LD8 501 aaPredicted RBP13.34□□□□□ -0.27
SRRM1-201ENST00000323848 OR8D1Q8WZ84 308 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 LRRC58Q96CX6 371 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 PPP3R2Q96LZ3 170 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 YIPF2Q9BWQ6 316 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 DGCR6LQ9BY27 220 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 RIBC2Q9H4K1 309 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 KCNE2Q9Y6J6 123 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 PARP14Q460N5 1801 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 GDI1P31150 447 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 LSM3P62310 102 aaKnown RBP13.34□□□□□ -0.27
SRRM1-201ENST00000323848 ZXDBP98169 803 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 IL5RAQ01344 420 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 DGCR6Q14129 220 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 GTDC1Q4AE62 458 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 FAM98BQ52LJ0 330 aaKnown RBP13.34□□□□□ -0.27
SRRM1-201ENST00000323848 TMEM31Q5JXX7 168 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 TCEAL8Q8IYN2 117 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 DERL2Q9GZP9 239 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 SYNDIG1Q9H7V2 258 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 TBC1D14Q9P2M4 693 aa13.34□□□□□ -0.27
SRRM1-201ENST00000323848 PRLP01236 227 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms