RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 THUMPD1Q9NXG2 353 aaKnown RBP16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 SHMT1P34896 483 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 HEPACAMQ14CZ8 416 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 OR2L8Q8NGY9 312 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 S100PBPQ96BU1 408 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 LGR5O75473 907 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 EPCAMP16422 314 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 HDCP19113 662 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 FMO3P31513 532 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 RGS19P49795 217 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 XKP51811 444 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 DPY19L1Q2PZI1 675 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 HMBOX1Q6NT76 420 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 MED27Q6P2C8 311 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 STRADAQ7RTN6 431 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 PRMT6Q96LA8 375 aaPredicted RBP16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 YTHDF1Q9BYJ9 559 aaKnown RBP16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 POLR2J2Q9GZM3 115 aaKnown RBP16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 TISP43B9A030 160 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 DNM1LO00429 736 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 LCN1P31025 176 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 COLEC12Q5KU26 742 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 FSTL4Q6MZW2 842 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 PHC2Q8IXK0 858 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 TNFRSF25Q93038 417 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 IFT27Q9BW83 186 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 DNAAF2Q9NVR5 837 aaKnown RBP16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 GADD45GO95257 159 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 MECP2P51608 486 aaKnown RBP16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 LIMK2P53671 638 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 IQSEC1Q6DN90 963 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 C12orf29Q8N999 325 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 COQ8BQ96D53 544 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 PIWIL1Q96J94 861 aaKnown RBP16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 IMP3Q9NV31 184 aaKnown RBP16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 GNAO1P09471 354 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 PRKCDQ05655 676 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 NDUFA9Q16795 377 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 IFI44LQ53G44 452 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 HAGHLQ6PII5 290 aaPredicted RBP16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 EXOSC8Q96B26 276 aaKnown RBP16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 EXOC2Q96KP1 924 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 PHB2Q99623 299 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 POLR3BQ9NW08 1133 aaPredicted RBP16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 PRPS2P11908 318 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 ANKRD46Q86W74 232 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 SMG7Q92540 1137 aaKnown RBP16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 DPAGT1Q9H3H5 408 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 IPPKQ9H8X2 491 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 IFNA21P01568 189 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 SPAM1P38567 509 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 MC1RQ01726 317 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 PPP1R26Q5T8A7 1209 aaPredicted RBP16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 NUP54Q7Z3B4 507 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 SPOCK2Q92563 424 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 CPNE2Q96FN4 548 aaPredicted RBP16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 SLC30A2Q9BRI3 323 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 CADM1Q9BY67 442 aaKnown RBP16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 GLOD4Q9HC38 313 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 ITGA10O75578 1167 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 UBXN7O94888 489 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 LGALS2P05162 132 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 CCDC28AQ8IWP9 274 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 OR6K6Q8NGW6 343 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 GTPBP2Q9BX10 602 aaKnown RBP16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 CDH1P12830 882 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 KELP23276 732 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 MRPS6P82932 125 aaKnown RBP16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 TBC1D25Q3MII6 688 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 OR2L2Q8NH16 312 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 PCDH18Q9HCL0 1135 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 KIAA1522Q9P206 1035 aaPredicted RBP16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 MALT1Q9UDY8 824 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 FER1L6Q2WGJ9 1857 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 GLDCP23378 1020 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 GRK6P43250 576 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 HSPB3Q12988 150 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 NEUROD4Q9HD90 331 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 TLX3O43711 291 aaPredicted RBP16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 POU2F1P14859 743 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 CSTF2P33240 577 aaKnown RBP eCLIP16.62■□□□□ 0.252e-8■■■■■ 34.9
SMCHD1-201ENST00000320876 MERTKQ12866 999 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 GPR153Q6NV75 609 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 DCSTAMPQ9H295 470 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 YDJCA8MPS7 323 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 CLDN4O14493 209 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 ARL3P36405 182 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 MAP3K8P41279 467 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 ZNF227Q86WZ6 799 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 OR4K2Q8NGD2 314 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 NUSAP1Q9BXS6 441 aaKnown RBP16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 CCSER2Q9H7U1 834 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 C14orf166Q9Y224 244 aaKnown RBP16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 PCDHGB5Q9Y5G0 923 aa16.62■□□□□ 0.25
SMCHD1-201ENST00000320876 RENP00797 406 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 ZNF823P16415 610 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 MCEMP1Q8IX19 187 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 ZBED6CLQ96FA7 236 aaPredicted RBP16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 NEDD4LQ96PU5 975 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 SPON1Q9HCB6 807 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms