RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 B4DGG1 531 aa15.05■□□□□ 0
PDLIM5-202ENST00000318007 UBXN8O00124 270 aa15.05■□□□□ 0
PDLIM5-202ENST00000318007 TOR1BO14657 336 aa15.05■□□□□ 0
PDLIM5-202ENST00000318007 LIN7AO14910 233 aaPredicted RBP15.05■□□□□ 0
PDLIM5-202ENST00000318007 KPNA5O15131 536 aa15.05■□□□□ 0
PDLIM5-202ENST00000318007 NME1P15531 152 aaKnown RBP15.05■□□□□ 0
PDLIM5-202ENST00000318007 PPP2R2AP63151 447 aa15.05■□□□□ 0
PDLIM5-202ENST00000318007 OVGP1Q12889 678 aa15.05■□□□□ 0
PDLIM5-202ENST00000318007 METRNLQ641Q3 311 aa15.05■□□□□ 0
PDLIM5-202ENST00000318007 LVRNQ6Q4G3 990 aa15.05■□□□□ 0
PDLIM5-202ENST00000318007 UBE2R2Q712K3 238 aaPredicted RBP15.05■□□□□ 0
PDLIM5-202ENST00000318007 ISCA2Q86U28 154 aa15.05■□□□□ 0
PDLIM5-202ENST00000318007 OR5AR1Q8NGP9 310 aa15.05■□□□□ 0
PDLIM5-202ENST00000318007 ESAMQ96AP7 390 aa15.05■□□□□ 0
PDLIM5-202ENST00000318007 PHF21BQ96EK2 531 aa15.05■□□□□ 0
PDLIM5-202ENST00000318007 TIMM29Q9BSF4 260 aa15.05■□□□□ 0
PDLIM5-202ENST00000318007 DERL2Q9GZP9 239 aa15.05■□□□□ 0
PDLIM5-202ENST00000318007 SUSD2Q9UGT4 822 aa15.05■□□□□ 0
PDLIM5-202ENST00000318007 PLLPQ9Y342 182 aa15.05■□□□□ 0
PDLIM5-202ENST00000318007 DGKBQ9Y6T7 804 aa15.05■□□□□ 0
PDLIM5-202ENST00000318007 C17orf113A0A1B0GUU1 675 aa15.05■□□□□ -0
PDLIM5-202ENST00000318007 SUPT3HB4E1H0 165 aa15.05■□□□□ -0
PDLIM5-202ENST00000318007 SUPT3HO75486 399 aa15.05■□□□□ -0
PDLIM5-202ENST00000318007 SLCO2B1O94956 709 aa15.05■□□□□ -0
PDLIM5-202ENST00000318007 CHN1P15882 459 aa15.05■□□□□ -0
PDLIM5-202ENST00000318007 IDSP22304 550 aa15.05■□□□□ -0
PDLIM5-202ENST00000318007 BLKP51451 505 aa15.05■□□□□ -0
PDLIM5-202ENST00000318007 CYHR1Q6ZMK1 362 aa15.05■□□□□ -0
PDLIM5-202ENST00000318007 SLC22A15Q8IZD6 547 aa15.05■□□□□ -0
PDLIM5-202ENST00000318007 FAM46DQ8NEK8 389 aa15.05■□□□□ -0
PDLIM5-202ENST00000318007 ATOH1Q92858 354 aaPredicted RBP15.05■□□□□ -0
PDLIM5-202ENST00000318007 GLMNQ92990 594 aa15.05■□□□□ -0
PDLIM5-202ENST00000318007 RMDN2Q96LZ7 410 aa15.05■□□□□ -0
PDLIM5-202ENST00000318007 OR52A5Q9H2C5 316 aa15.05■□□□□ -0
PDLIM5-202ENST00000318007 TAAR2Q9P1P5 351 aa15.05■□□□□ -0
PDLIM5-202ENST00000318007 GRID1Q9ULK0 1009 aa15.05■□□□□ -0
PDLIM5-202ENST00000318007 ACTL7BQ9Y614 415 aa15.05■□□□□ -0
PDLIM5-202ENST00000318007 ZFC3H1O60293 1989 aaKnown RBP15.05■□□□□ -0
PDLIM5-202ENST00000318007 PRR5-ARHGAP8B1AHC4 643 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 IFRD1O00458 451 aaPredicted RBP15.04■□□□□ -0
PDLIM5-202ENST00000318007 CD9P21926 228 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 CTSKP43235 329 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 HLA-BQ31612 363 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 C18orf21Q32NC0 220 aaPredicted RBP15.04■□□□□ -0
PDLIM5-202ENST00000318007 TECRLQ5HYJ1 363 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 RPS27LQ71UM5 84 aaKnown RBP15.04■□□□□ -0
PDLIM5-202ENST00000318007 DCP2Q8IU60 420 aaKnown RBP15.04■□□□□ -0
PDLIM5-202ENST00000318007 C2orf73Q8N5S3 287 aaPredicted RBP15.04■□□□□ -0
PDLIM5-202ENST00000318007 ZNF548Q8NEK5 533 aaPredicted RBP15.04■□□□□ -0
PDLIM5-202ENST00000318007 FAM174AQ8TBP5 190 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 ALKBH8Q96BT7 664 aaKnown RBP15.04■□□□□ -0
PDLIM5-202ENST00000318007 INSM2Q96T92 566 aaPredicted RBP15.04■□□□□ -0
PDLIM5-202ENST00000318007 HGH1Q9BTY7 390 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 TRNAU1APQ9NX07 287 aaKnown RBP15.04■□□□□ -0
PDLIM5-202ENST00000318007 NKIRAS1Q9NYS0 192 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 DMXL1Q9Y485 3027 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 WDFY3Q8IZQ1 3526 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 PLIN3O60664 434 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 SBK3P0C264 359 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 MYF5P13349 255 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 TSTA3Q13630 321 aaPredicted RBP15.04■□□□□ -0
PDLIM5-202ENST00000318007 GBX1Q14549 363 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 ACAP2Q15057 778 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 DUOXA1Q1HG43 343 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.04■□□□□ -0
PDLIM5-202ENST00000318007 SBSNQ6UWP8 590 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 ZCCHC23Q6ZST2 131 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 ZNF761Q86XN6 746 aaPredicted RBP15.04■□□□□ -0
PDLIM5-202ENST00000318007 TFGQ92734 400 aaPredicted RBP15.04■□□□□ -0
PDLIM5-202ENST00000318007 ELF4Q99607 663 aaPredicted RBP15.04■□□□□ -0
PDLIM5-202ENST00000318007 EGFL8Q99944 293 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 GSDMCQ9BYG8 508 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 GAREM1Q9H706 876 aa15.04■□□□□ -0
PDLIM5-202ENST00000318007 MUC6Q6W4X9 2439 aa15.03■□□□□ -0
PDLIM5-202ENST00000318007 CACNA1EQ15878 2313 aa15.03■□□□□ -0
PDLIM5-202ENST00000318007 PRPF4O43172 522 aaKnown RBP eCLIP15.03■□□□□ -0
PDLIM5-202ENST00000318007 AQP9O43315 295 aa15.03■□□□□ -0
PDLIM5-202ENST00000318007 SLC34A2O95436 690 aa15.03■□□□□ -0
PDLIM5-202ENST00000318007 PROCP04070 461 aa15.03■□□□□ -0
PDLIM5-202ENST00000318007 ENO3P13929 434 aaPredicted RBP15.03■□□□□ -0
PDLIM5-202ENST00000318007 HNRNPKP61978 463 aaKnown RBP eCLIP15.03■□□□□ -0
PDLIM5-202ENST00000318007 LRP8Q14114 963 aa15.03■□□□□ -0
PDLIM5-202ENST00000318007 KRT33BQ14525 404 aa15.03■□□□□ -0
PDLIM5-202ENST00000318007 PFKFB4Q16877 469 aa15.03■□□□□ -0
PDLIM5-202ENST00000318007 TSNAXIP1Q2TAA8 658 aa15.03■□□□□ -0
PDLIM5-202ENST00000318007 PDZD3Q86UT5 571 aa15.03■□□□□ -0
PDLIM5-202ENST00000318007 PPFIBP2Q8ND30 876 aa15.03■□□□□ -0
PDLIM5-202ENST00000318007 FAM76AQ8TAV0 307 aa15.03■□□□□ -0
PDLIM5-202ENST00000318007 DYDC1Q8WWB3 177 aa15.03■□□□□ -0
PDLIM5-202ENST00000318007 FOPNLQ96NB1 174 aa15.03■□□□□ -0
PDLIM5-202ENST00000318007 FERD3LQ96RJ6 166 aa15.03■□□□□ -0
PDLIM5-202ENST00000318007 ZDHHC5Q9C0B5 715 aa15.03■□□□□ -0
PDLIM5-202ENST00000318007 MRPL46Q9H2W6 279 aaKnown RBP15.03■□□□□ -0
PDLIM5-202ENST00000318007 CD274Q9NZQ7 290 aa15.03■□□□□ -0
PDLIM5-202ENST00000318007 DNMT3AQ9Y6K1 912 aaPredicted RBP15.03■□□□□ -0
PDLIM5-202ENST00000318007 LRRC14BA6NHZ5 514 aa15.02■□□□□ -0
PDLIM5-202ENST00000318007 ARHGEF33A8MVX0 844 aa15.02■□□□□ -0
PDLIM5-202ENST00000318007 YY2O15391 372 aa15.02■□□□□ -0
PDLIM5-202ENST00000318007 CBSLP0DN79 551 aa15.02■□□□□ -0
PDLIM5-202ENST00000318007 NEFHP12036 1026 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms