RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 ADAM12O43184 909 aa13.17□□□□□ -0.3
PCDHB9-201ENST00000316105 TULP3O75386 442 aa13.17□□□□□ -0.3
PCDHB9-201ENST00000316105 H6PDO95479 791 aa13.17□□□□□ -0.3
PCDHB9-201ENST00000316105 THRBP10828 461 aa13.17□□□□□ -0.3
PCDHB9-201ENST00000316105 PRPS2P11908 318 aa13.17□□□□□ -0.3
PCDHB9-201ENST00000316105 CCL5P13501 91 aa13.17□□□□□ -0.3
PCDHB9-201ENST00000316105 S100A5P33763 92 aa13.17□□□□□ -0.3
PCDHB9-201ENST00000316105 RD3Q7Z3Z2 195 aa13.17□□□□□ -0.3
PCDHB9-201ENST00000316105 ZC3H7AQ8IWR0 971 aaKnown RBP13.17□□□□□ -0.3
PCDHB9-201ENST00000316105 CFAP206Q8IYR0 622 aa13.17□□□□□ -0.3
PCDHB9-201ENST00000316105 CSGALNACT1Q8TDX6 532 aa13.17□□□□□ -0.3
PCDHB9-201ENST00000316105 ZNF296Q8WUU4 475 aaPredicted RBP13.17□□□□□ -0.3
PCDHB9-201ENST00000316105 L3HYPDHQ96EM0 354 aa13.17□□□□□ -0.3
PCDHB9-201ENST00000316105 NSMCE3Q96MG7 304 aa13.17□□□□□ -0.3
PCDHB9-201ENST00000316105 SCHIP1Q9P0W5 487 aaPredicted RBP13.17□□□□□ -0.3
PCDHB9-201ENST00000316105 MAPRE3Q9UPY8 281 aa13.17□□□□□ -0.3
PCDHB9-201ENST00000316105 FGBP02675 491 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 CLTBP09497 229 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 EPORP19235 508 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 RGRP47804 291 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 MS4A2Q01362 244 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 CAP1Q01518 475 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 TCEA2Q15560 299 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 C22orf39Q6P5X5 142 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 GDPD4Q6W3E5 623 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 KBTBD6Q86V97 674 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 KRT78Q8N1N4 520 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 NXPE1Q8N323 547 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 OR52B6Q8NGF0 335 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 CYB5D2Q8WUJ1 264 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 UBE2E3Q969T4 207 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 CASD1Q96PB1 797 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 ZNF382Q96SR6 550 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 LOC285095A0A1B0GVY8 99 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 CXCR6O00574 342 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 TPD52L2O43399 206 aaKnown RBP13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 FGF19O95750 216 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 HNF1BP35680 557 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 NEK2P51955 445 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 FGD3Q5JSP0 725 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 INTS11Q5TA45 600 aaKnown RBP13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 TMEM220Q6QAJ8 160 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 CYP2U1Q7Z449 544 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 AHI1Q8N157 1196 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 SMG7Q92540 1137 aaKnown RBP13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 SLC32A1Q9H598 525 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 SAMD4AQ9UPU9 718 aaKnown RBP13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 KIAA0100Q14667 2235 aaKnown RBP13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 URB1O60287 2271 aaKnown RBP13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 I6L893 689 aaPredicted RBP13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 ANXA4P09525 319 aaPredicted RBP13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 RPL26P61254 145 aaKnown RBP13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 FOXM1Q08050 763 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 LMAN2Q12907 356 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 ERMP1Q7Z2K6 904 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 GALNT5Q7Z7M9 940 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 PHYKPLQ8IUZ5 450 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 STX19Q8N4C7 294 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 FUBP1Q96AE4 644 aaKnown RBP13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 PLEKHA8Q96JA3 519 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 RETREG1Q9H6L5 497 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 USE1Q9NZ43 259 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 VPS4AQ9UN37 437 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 DUSP12Q9UNI6 340 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 RNF11Q9Y3C5 154 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 PRORSD1PA6NEY8 169 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 PPP6CO00743 305 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 PPP2R1BP30154 601 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 PWP1Q13610 501 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 TP53BP2Q13625 1128 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 ARSIQ5FYB1 569 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 ZNF783Q6ZMS7 281 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 TRIM48Q8IWZ4 208 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 PIANPQ8IYJ0 282 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 LEMD2Q8NC56 503 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 TRPV3Q8NET8 790 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 SLC22A14Q9Y267 594 aa13.16□□□□□ -0.3
PCDHB9-201ENST00000316105 LEFTY2O00292 366 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 FGF18O76093 207 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 SCELO95171 688 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 ITGBL1O95965 494 aaPredicted RBP13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 ATXN1LP0C7T5 689 aaKnown RBP13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 HOXC13P31276 330 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 HMGCLP35914 325 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 CPOXP36551 454 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 DGKGP49619 791 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 GALNT1Q10472 559 aaPredicted RBP13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 MERTKQ12866 999 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 NADSYN1Q6IA69 706 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 CYP4Z1Q86W10 505 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 APCDD1Q8J025 514 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 GALNT8Q9NY28 637 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 B4GALT6Q9UBX8 382 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 RAP2AP10114 183 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 ANXA11P50995 505 aaKnown RBP13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 FOXA1P55317 472 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 NADK2Q4G0N4 442 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 SPANXN4Q5MJ08 99 aa13.15□□□□□ -0.3
PCDHB9-201ENST00000316105 RTN4RL1Q86UN2 441 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms