RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 PENKP01210 267 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-202ENST00000315962 CYP17A1P05093 508 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 HSPA7P48741 367 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 DGKGP49619 791 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 CLCN7P51798 805 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 DIO3P55073 304 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 CACNG1Q06432 222 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 BNIP3Q12983 259 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 ARHGEF7Q14155 803 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 ZNF77Q15935 545 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 VPS26BQ4G0F5 336 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 FGD3Q5JSP0 725 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 PRSS36Q5K4E3 855 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 GPSM1Q86YR5 675 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 VRK3Q8IV63 474 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 FAM217AQ8IXS0 508 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 CPXM2Q8N436 756 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 RDH11Q8TC12 318 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 C12orf43Q96C57 262 aaKnown RBP7.48□□□□□ -1.21
TRIM55-202ENST00000315962 TUBGCP3Q96CW5 907 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 SCRN2Q96FV2 425 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 CNDP1Q96KN2 507 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 HGH1Q9BTY7 390 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 CCDC28BQ9BUN5 200 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 NKX2-4Q9H2Z4 354 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 TUBB1Q9H4B7 451 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 HACD3Q9P035 362 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 ZNF225Q9UK10 706 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 MYRFQ9Y2G1 1151 aa7.48□□□□□ -1.21
TRIM55-202ENST00000315962 RNF103-CHMP3A0A140T963 221 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 TBC1D3BA6NDS4 549 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 PSMD12O00232 456 aaPredicted RBP7.47□□□□□ -1.21
TRIM55-202ENST00000315962 MAN1A2O60476 641 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 WISP3O95389 354 aaPredicted RBP7.47□□□□□ -1.21
TRIM55-202ENST00000315962 H6PDO95479 791 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 PIM1P11309 404 aaPredicted RBP7.47□□□□□ -1.21
TRIM55-202ENST00000315962 OGNP20774 298 aaKnown RBP7.47□□□□□ -1.21
TRIM55-202ENST00000315962 CLCQ05315 142 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 TRIM25Q14258 630 aaKnown RBP7.47□□□□□ -1.21
TRIM55-202ENST00000315962 CDKN3Q16667 212 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 C6orf10Q5SRN2 563 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 PPP2R2DQ66LE6 453 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 TANGO2Q6ICL3 276 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 TTC33Q6PID6 262 aaPredicted RBP7.47□□□□□ -1.21
TRIM55-202ENST00000315962 GDPD4Q6W3E5 623 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 ZNF783Q6ZMS7 281 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 RETREG3Q86VR2 466 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 SP7Q8TDD2 431 aaPredicted RBP7.47□□□□□ -1.21
TRIM55-202ENST00000315962 GIPC3Q8TF64 312 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 SEPHS2Q99611 448 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 KXD1Q9BQD3 176 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 SLC2A11Q9BYW1 496 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 AKTIPQ9H8T0 292 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 PCDH12Q9NPG4 1184 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 INTS10Q9NVR2 710 aaKnown RBP7.47□□□□□ -1.21
TRIM55-202ENST00000315962 ERVW-1Q9UQF0 538 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 HS3ST2Q9Y278 367 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 UPK3BL1B0FP48 263 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 UPK3BL2E5RIL1 263 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 K7ESM1 405 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 GIPC1O14908 333 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 UBDO15205 165 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 OR4F21O95013 312 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 POP4O95707 220 aaKnown RBP7.47□□□□□ -1.21
TRIM55-202ENST00000315962 ITGALP20701 1170 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 XPAP23025 273 aaPredicted RBP7.47□□□□□ -1.21
TRIM55-202ENST00000315962 PTGER3P43115 390 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 KPNA2P52292 529 aaKnown RBP7.47□□□□□ -1.21
TRIM55-202ENST00000315962 B4GALNT1Q00973 533 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 PRKCQQ04759 706 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 PIGFQ07326 219 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 TSTA3Q13630 321 aaPredicted RBP7.47□□□□□ -1.21
TRIM55-202ENST00000315962 SLC14A2Q15849 920 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 MAP7D1Q3KQU3 841 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 TBCELQ5QJ74 424 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 OTUD3Q5T2D3 398 aaPredicted RBP7.47□□□□□ -1.21
TRIM55-202ENST00000315962 MPP7Q5T2T1 576 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 ELMSAN1Q6PJG2 1045 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 EPHX4Q8IUS5 362 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 NPAS3Q8IXF0 933 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 KIAA1191Q96A73 305 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 LMLNQ96KR4 655 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 SYTL2Q9HCH5 934 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 FARSBQ9NSD9 589 aaKnown RBP7.47□□□□□ -1.21
TRIM55-202ENST00000315962 MID2Q9UJV3 735 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 TMPRSS11EQ9UL52 423 aa7.47□□□□□ -1.21
TRIM55-202ENST00000315962 MAGED1Q9Y5V3 778 aaPredicted RBP7.47□□□□□ -1.21
TRIM55-202ENST00000315962 PTPRSQ13332 1948 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 H3BNH8 94 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 ATP5BP06576 529 aaKnown RBP7.46□□□□□ -1.21
TRIM55-202ENST00000315962 ALDOCP09972 364 aaKnown RBP7.46□□□□□ -1.21
TRIM55-202ENST00000315962 ADH5P11766 374 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 PCNAP12004 261 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 HGFP14210 728 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 ZNF23P17027 643 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 ZNF7P17097 686 aaPredicted RBP7.46□□□□□ -1.21
TRIM55-202ENST00000315962 ACRV1P26436 265 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 PRDX6P30041 224 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 CCR7P32248 378 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 NNMTP40261 264 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms