RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 CRISPLD1Q9H336 500 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 CDH7Q9ULB5 785 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 LRCH1Q9Y2L9 728 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 ATXN2Q99700 1313 aaKnown RBP13.43□□□□□ -0.26
DDX54-202ENST00000314045 PRPS2P11908 318 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 CMPK1P30085 196 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 PTCHD3Q3KNS1 767 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 BHLHB9Q6PI77 547 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 GAREM2Q75VX8 874 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 SPPL3Q8TCT6 385 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 FGF13Q92913 245 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 GLYATL1Q969I3 302 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 SCRN2Q96FV2 425 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 CXXC1Q9P0U4 656 aaPredicted RBP13.43□□□□□ -0.26
DDX54-202ENST00000314045 C15orf41Q9Y2V0 281 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 DHRS12A0PJE2 317 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 CXCL10P02778 98 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 SRPRAP08240 638 aaKnown RBP13.43□□□□□ -0.26
DDX54-202ENST00000314045 KRT20P35900 424 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 INPP1P49441 399 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 HLA-DQA1Q5Y7H0 255 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 TRIM40Q6P9F5 258 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 TSPAN33Q86UF1 283 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 C10orf53Q8N6V4 93 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 CDCA3Q99618 268 aaPredicted RBP13.43□□□□□ -0.26
DDX54-202ENST00000314045 ZNF184Q99676 751 aaPredicted RBP13.43□□□□□ -0.26
DDX54-202ENST00000314045 EPB41L4BQ9H329 900 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 POPDC3Q9HBV1 291 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 LZTS1Q9Y250 596 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 PRKAB1Q9Y478 270 aa13.43□□□□□ -0.26
DDX54-202ENST00000314045 CFAP20Q9Y6A4 193 aaKnown RBP13.43□□□□□ -0.26
DDX54-202ENST00000314045 F11P03951 625 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 FGF3P11487 239 aaPredicted RBP13.42□□□□□ -0.26
DDX54-202ENST00000314045 RPL10P27635 214 aaKnown RBP13.42□□□□□ -0.26
DDX54-202ENST00000314045 PREPP48147 710 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 PNLIPRP1P54315 467 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 OCA2Q04671 838 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 PRKCQQ04759 706 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 PWP1Q13610 501 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 SEMA3AQ14563 771 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 CCSAPQ6IQ19 270 aaPredicted RBP13.42□□□□□ -0.26
DDX54-202ENST00000314045 ANO7Q6IWH7 933 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 CYP2U1Q7Z449 544 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 RALGPS2Q86X27 583 aaPredicted RBP13.42□□□□□ -0.26
DDX54-202ENST00000314045 NECTIN4Q96NY8 510 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 PCBD2Q9H0N5 130 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 GDE1Q9NZC3 331 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 A0A1W2PP55 124 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 IFNA16P05015 189 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 ANXA6P08133 673 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 PPIBP23284 216 aaKnown RBP13.42□□□□□ -0.26
DDX54-202ENST00000314045 PRDX6P30041 224 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 PTDSS1P48651 473 aaKnown RBP13.42□□□□□ -0.26
DDX54-202ENST00000314045 NRF1Q16656 503 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 ACSBG2Q5FVE4 666 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 FGD3Q5JSP0 725 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 RTL10Q7L3V2 364 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 ADHFE1Q8IWW8 467 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 LIX1Q8N485 282 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 MYRFLQ96LU7 910 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 ANKRD27Q96NW4 1050 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 DACH2Q96NX9 599 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 AKTIPQ9H8T0 292 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 INTS7Q9NVH2 962 aaKnown RBP13.42□□□□□ -0.26
DDX54-202ENST00000314045 CDH22Q9UJ99 828 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 LINC01553A4QN01 128 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 HS6ST1O60243 411 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 KLF8O95600 359 aaPredicted RBP13.42□□□□□ -0.26
DDX54-202ENST00000314045 ANPEPP15144 967 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 BLKP51451 505 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 NFKB2Q00653 900 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 AMIGO2Q86SJ2 522 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 PARGQ86W56 976 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 DENND1AQ8TEH3 1009 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 RAB7BQ96AH8 199 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 CEP19Q96LK0 163 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 EBPLQ9BY08 206 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 ARMC7Q9H6L4 198 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 REEP1Q9H902 201 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 DNMT3BQ9UBC3 853 aaKnown RBP13.42□□□□□ -0.26
DDX54-202ENST00000314045 RPS6KA6Q9UK32 745 aa13.42□□□□□ -0.26
DDX54-202ENST00000314045 OR10H2O60403 315 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 NR2F1P10589 423 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 RPS14P62263 151 aaKnown RBP13.41□□□□□ -0.26
DDX54-202ENST00000314045 ERVK-8P63133 956 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 SNAP47Q5SQN1 464 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 DHRSXQ8N5I4 330 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 UTP15Q8TED0 518 aaKnown RBP13.41□□□□□ -0.26
DDX54-202ENST00000314045 OLFM1Q99784 485 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 CADM1Q9BY67 442 aaKnown RBP13.41□□□□□ -0.26
DDX54-202ENST00000314045 LMAN2LQ9H0V9 348 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 SRMSQ9H3Y6 488 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 KLHL3Q9UH77 587 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 PPM1HQ9ULR3 514 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 KCNK6Q9Y257 313 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 RUVBL1Q9Y265 456 aaKnown RBP13.41□□□□□ -0.26
DDX54-202ENST00000314045 LIN7AO14910 233 aaPredicted RBP13.41□□□□□ -0.26
DDX54-202ENST00000314045 GRID2O43424 1007 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 ADH1BP00325 375 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 BPIP17213 487 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms