RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 LARGE1O95461 756 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 ANXA3P12429 323 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 RHBDL3P58872 404 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 IL5RAQ01344 420 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 CBLBQ13191 982 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 HMGN3Q15651 99 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 DENND5AQ6IQ26 1287 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 MTSS1LQ765P7 747 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 SYVN1Q86TM6 617 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 NRSN1Q8IZ57 195 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 DNMT3AQ9Y6K1 912 aaPredicted RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 SLC37A4O43826 429 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 SLC19A2O60779 497 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 GLRA2P23416 452 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 GCSHP23434 173 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 MAGEA6P43360 314 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 IRF4Q15306 451 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 OASLQ15646 514 aaKnown RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 CCDC85BQ15834 202 aaPredicted RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 RTP2Q5QGT7 225 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 IFNLR1Q8IU57 520 aaPredicted RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 PLPP6Q8IY26 295 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 CRYBG2Q8N1P7 616 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 GDPD1Q8N9F7 314 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 RXFP2Q8WXD0 754 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 AGAP2Q99490 1192 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 PDCD11Q14690 1871 aaKnown RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 PARP14Q460N5 1801 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 CDHR4A6H8M9 788 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 E7ESA3 106 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 NUDT14O95848 222 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 ETFAP13804 333 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 FOSL1P15407 271 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 KEAP1Q14145 624 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 HSF5Q4G112 596 aaPredicted RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 DCST1Q5T197 706 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 ATG9BQ674R7 924 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 ZNF550Q7Z398 422 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 TTC7BQ86TV6 843 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 SATL1Q86VE3 508 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 CPA6Q8N4T0 437 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 FAM47BQ8NA70 645 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 LPCAT1Q8NF37 534 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 HOXD1Q9GZZ0 328 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 TMEM168Q9H0V1 697 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 CST11Q9H112 138 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 SLC32A1Q9H598 525 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 ELAC1Q9H777 363 aaKnown RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 LRTM1Q9HBL6 345 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 TIGARQ9NQ88 270 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 OXSMQ9NWU1 459 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 MTMR10Q9NXD2 777 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 UGT2A1Q9Y4X1 527 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 AP4B1Q9Y6B7 739 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 SPTLC1O15269 473 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 GJA1P17302 382 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 PTPN1P18031 435 aaKnown RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 GMPRP36959 345 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 POLR2JP52435 117 aaKnown RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 SCAND1P57086 179 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 SSBP1Q04837 148 aaKnown RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 LIN52Q52LA3 116 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 ELP5Q8TE02 316 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 SETD7Q8WTS6 366 aaKnown RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 PDGFDQ9GZP0 370 aaPredicted RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 GLOD4Q9HC38 313 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 ARID2Q68CP9 1835 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 RNASEH2BQ5TBB1 312 aaKnown RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 MBOAT1Q6ZNC8 495 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 MCUBQ9NWR8 336 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 GLTPQ9NZD2 209 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 SAMHD1Q9Y3Z3 626 aaKnown RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 PATJQ8NI35 1801 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 DLGAP1O14490 977 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 ADAM12O43184 909 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 OR6A2O95222 327 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 EBLN1P0CF75 366 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 MYBP10242 640 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 IMPDH1P20839 514 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 PRKCHP24723 683 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 KHKP50053 298 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 TEKQ02763 1124 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 ASTE1Q2TB18 679 aaPredicted RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 PTCHD3Q3KNS1 767 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 TBC1D25Q3MII6 688 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 FBXL19Q6PCT2 694 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 IFNEQ86WN2 208 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 SYT12Q8IV01 421 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 PSD4Q8NDX1 1056 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 IFT46Q9NQC8 304 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 FBXO5Q9UKT4 447 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 STYXL1Q9Y6J8 313 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 CDK2P24941 298 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 RPIAP49247 311 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 TTMPQ5BVD1 217 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 XKR4Q5GH76 650 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 MFSD7Q6UXD7 560 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 UFD1Q92890 307 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 BORCS6Q96GS4 357 aa3.95□□□□□ -1.78
USH2A-201ENST00000307340 SNX10Q9Y5X0 201 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms