RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ASIC4Q96FT7 647 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 REXO5Q96IC2 774 aaKnown RBP14.34□□□□□ -0.11
PTPN9-201ENST00000306726 SYTL2Q9HCH5 934 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 A0A1W2PP18 115 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 KPNA4O00629 521 aaPredicted RBP14.33□□□□□ -0.12
PTPN9-201ENST00000306726 KPNA5O15131 536 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 PQBP1O60828 265 aaKnown RBP14.33□□□□□ -0.12
PTPN9-201ENST00000306726 ADAM23O75077 832 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 NDUFS2O75306 463 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 IL12AP29459 219 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 PBLDP30039 288 aaPredicted RBP14.33□□□□□ -0.12
PTPN9-201ENST00000306726 VTCN1Q7Z7D3 282 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 TICAM1Q8IUC6 712 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 RTL3Q8N8U3 475 aaKnown RBP14.33□□□□□ -0.12
PTPN9-201ENST00000306726 KCNS3Q9BQ31 491 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 AGPAT4Q9NRZ5 378 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 OSER1Q9NX31 292 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 SH3BP4Q9P0V3 963 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 PRKAG2Q9UGJ0 569 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 KIAA0355O15063 1070 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 CHRNA1P02708 482 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 IDUAP35475 653 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 OR4F6Q8NGB9 312 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 MCFD2Q8NI22 146 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 PAWRQ96IZ0 340 aaKnown RBP14.33□□□□□ -0.12
PTPN9-201ENST00000306726 SLC2A13Q96QE2 648 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 SIAEQ9HAT2 523 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 HMG20AQ9NP66 347 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 C14orf119Q9NWQ9 140 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 PDP1Q9P0J1 537 aaPredicted RBP14.33□□□□□ -0.12
PTPN9-201ENST00000306726 CRLS1Q9UJA2 301 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 PSME2Q9UL46 239 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 SAMHD1Q9Y3Z3 626 aaKnown RBP14.33□□□□□ -0.12
PTPN9-201ENST00000306726 CLDN25C9JDP6 229 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 BCKDKO14874 412 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 HOXA2O43364 376 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 CLPXO76031 633 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 VIPP01282 170 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 LCKP06239 509 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 FCGR1AP12314 374 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 DNAJB2P25686 324 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 RGRP47804 291 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 PPP3CCP48454 512 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 TLE2Q04725 743 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 TRAP1Q12931 704 aaKnown RBP14.33□□□□□ -0.12
PTPN9-201ENST00000306726 BNIP2Q12982 314 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 ABRAXAS2Q15018 415 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 TXNDC11Q6PKC3 985 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 TMC5Q6UXY8 1006 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 TMEM125Q96AQ2 219 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 MYRFLQ96LU7 910 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 CGREF1Q99674 301 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 CIPCQ9C0C6 399 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 TMEM39AQ9NV64 488 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 SCN3BQ9NY72 215 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 CDH9Q9ULB4 789 aa14.33□□□□□ -0.12
PTPN9-201ENST00000306726 CAPN15O75808 1086 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 NPTX1Q15818 432 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 KIAA1841Q6NSI8 718 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 SPATC1Q76KD6 591 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 HMGN2P46Q86SG4 172 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 PIK3C3Q8NEB9 887 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 FAR1Q8WVX9 515 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 ASPSCR1Q9BZE9 553 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 MAGEE1Q9HCI5 957 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 ATAD3AQ9NVI7 634 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 TBX21Q9UL17 535 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 ZNF490Q9ULM2 529 aaPredicted RBP14.32□□□□□ -0.12
PTPN9-201ENST00000306726 BOLA1Q9Y3E2 137 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 TARM1B6A8C7 271 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 FXYD1O00168 92 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 ZNF623O75123 536 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 GRK3P35626 688 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 ALDH3B2P48448 385 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 OXCT1P55809 520 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 MAPRE1Q15691 268 aaKnown RBP14.32□□□□□ -0.12
PTPN9-201ENST00000306726 ZBTB6Q15916 424 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 LETMD1Q6P1Q0 360 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 BLOC1S3Q6QNY0 202 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 ZNF280BQ86YH2 543 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 HIPK1Q86Z02 1210 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 INIPQ9NRY2 104 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 CD300AQ9UGN4 299 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 CD84Q9UIB8 345 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 VPS28Q9UK41 221 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 FCF1Q9Y324 198 aaKnown RBP14.32□□□□□ -0.12
PTPN9-201ENST00000306726 F5H5T6 163 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 STAU1O95793 577 aaKnown RBP14.32□□□□□ -0.12
PTPN9-201ENST00000306726 BMP2P12643 396 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 TCEA1P23193 301 aaKnown RBP14.32□□□□□ -0.12
PTPN9-201ENST00000306726 WARSP23381 471 aaKnown RBP14.32□□□□□ -0.12
PTPN9-201ENST00000306726 SLC36A3Q495N2 470 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 TPGS1Q6ZTW0 290 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 PELI3Q8N2H9 469 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 SELENOMQ8WWX9 145 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.32□□□□□ -0.12
PTPN9-201ENST00000306726 MYEOVQ96EZ4 313 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 KCNC2Q96PR1 638 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 ZBED2Q9BTP6 218 aa14.32□□□□□ -0.12
PTPN9-201ENST00000306726 CLPBQ9H078 707 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms