RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 COLEC10Q9Y6Z7 277 aa23.9■■□□□ 1.42
HOXC9-201ENST00000303450 CNOT1A5YKK6 2376 aaKnown RBP23.9■■□□□ 1.42
HOXC9-201ENST00000303450 PPM1DO15297 605 aa23.89■■□□□ 1.42
HOXC9-201ENST00000303450 CBSLP0DN79 551 aa23.89■■□□□ 1.42
HOXC9-201ENST00000303450 ACADLP28330 430 aa23.89■■□□□ 1.42
HOXC9-201ENST00000303450 HOXD11P31277 338 aaPredicted RBP23.89■■□□□ 1.42
HOXC9-201ENST00000303450 CBSP35520 551 aa23.89■■□□□ 1.42
HOXC9-201ENST00000303450 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.89■■□□□ 1.42
HOXC9-201ENST00000303450 DUS1LQ6P1R4 473 aaKnown RBP23.89■■□□□ 1.42
HOXC9-201ENST00000303450 PAQR3Q6TCH7 311 aa23.89■■□□□ 1.42
HOXC9-201ENST00000303450 CPNE9Q8IYJ1 553 aa23.89■■□□□ 1.42
HOXC9-201ENST00000303450 CFAP61Q8NHU2 1237 aa23.89■■□□□ 1.42
HOXC9-201ENST00000303450 CCDC74AQ96AQ1 378 aa23.89■■□□□ 1.42
HOXC9-201ENST00000303450 TSPAN17Q96FV3 270 aa23.89■■□□□ 1.42
HOXC9-201ENST00000303450 FERD3LQ96RJ6 166 aa23.89■■□□□ 1.42
HOXC9-201ENST00000303450 ASF1AQ9Y294 204 aa23.89■■□□□ 1.42
HOXC9-201ENST00000303450 ASXL3Q9C0F0 2248 aa23.89■■□□□ 1.41
HOXC9-201ENST00000303450 ERLIN1O75477 346 aa23.89■■□□□ 1.41
HOXC9-201ENST00000303450 ENO3P13929 434 aaPredicted RBP23.89■■□□□ 1.41
HOXC9-201ENST00000303450 NDUFS1P28331 727 aa23.89■■□□□ 1.41
HOXC9-201ENST00000303450 ACADVLP49748 655 aa23.89■■□□□ 1.41
HOXC9-201ENST00000303450 RGS4P49798 205 aa23.89■■□□□ 1.41
HOXC9-201ENST00000303450 PGGT1BP53609 377 aa23.89■■□□□ 1.41
HOXC9-201ENST00000303450 MROH9Q5TGP6 573 aa23.89■■□□□ 1.41
HOXC9-201ENST00000303450 TAOK1Q7L7X3 1001 aa23.89■■□□□ 1.41
HOXC9-201ENST00000303450 RBM12BQ8IXT5 1001 aaKnown RBP23.89■■□□□ 1.41
HOXC9-201ENST00000303450 PHC3Q8NDX5 983 aa23.89■■□□□ 1.41
HOXC9-201ENST00000303450 FOPNLQ96NB1 174 aa23.89■■□□□ 1.41
HOXC9-201ENST00000303450 SLC38A3Q99624 504 aa23.89■■□□□ 1.41
HOXC9-201ENST00000303450 CAB39LQ9H9S4 337 aa23.89■■□□□ 1.41
HOXC9-201ENST00000303450 SLC40A1Q9NP59 571 aa23.89■■□□□ 1.41
HOXC9-201ENST00000303450 DLL3Q9NYJ7 618 aa23.89■■□□□ 1.41
HOXC9-201ENST00000303450 PRAMEF33A0A0G2JMD5 474 aa23.88■■□□□ 1.41
HOXC9-201ENST00000303450 SPAARA0A1B0GVQ0 90 aa23.88■■□□□ 1.41
HOXC9-201ENST00000303450 DCDC2BA2VCK2 349 aa23.88■■□□□ 1.41
HOXC9-201ENST00000303450 EIF3FO00303 357 aaPredicted RBP23.88■■□□□ 1.41
HOXC9-201ENST00000303450 CTIFO43310 598 aaKnown RBP23.88■■□□□ 1.41
HOXC9-201ENST00000303450 PNLIPP16233 465 aa23.88■■□□□ 1.41
HOXC9-201ENST00000303450 STMN1P16949 149 aa23.88■■□□□ 1.41
HOXC9-201ENST00000303450 SERPINB9P50453 376 aa23.88■■□□□ 1.41
HOXC9-201ENST00000303450 RP1P56715 2156 aa23.88■■□□□ 1.41
HOXC9-201ENST00000303450 SIM1P81133 766 aaPredicted RBP23.88■■□□□ 1.41
HOXC9-201ENST00000303450 CCDC157Q569K6 752 aa23.88■■□□□ 1.41
HOXC9-201ENST00000303450 PERM1Q5SV97 790 aa23.88■■□□□ 1.41
HOXC9-201ENST00000303450 SPNS2Q8IVW8 549 aa23.88■■□□□ 1.41
HOXC9-201ENST00000303450 CEP97Q8IW35 865 aa23.88■■□□□ 1.41
HOXC9-201ENST00000303450 MYRIPQ8NFW9 859 aa23.88■■□□□ 1.41
HOXC9-201ENST00000303450 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.88■■□□□ 1.41
HOXC9-201ENST00000303450 MVB12BQ9H7P6 319 aa23.88■■□□□ 1.41
HOXC9-201ENST00000303450 FETUBQ9UGM5 382 aa23.88■■□□□ 1.41
HOXC9-201ENST00000303450 ZNF180Q9UJW8 692 aa23.88■■□□□ 1.41
HOXC9-201ENST00000303450 GIPC1O14908 333 aa23.87■■□□□ 1.41
HOXC9-201ENST00000303450 KRT38O76015 456 aa23.87■■□□□ 1.41
HOXC9-201ENST00000303450 KCNK5O95279 499 aa23.87■■□□□ 1.41
HOXC9-201ENST00000303450 GP1BAP07359 652 aa23.87■■□□□ 1.41
HOXC9-201ENST00000303450 IL2P60568 153 aa23.87■■□□□ 1.41
HOXC9-201ENST00000303450 BMPR2Q13873 1038 aa23.87■■□□□ 1.41
HOXC9-201ENST00000303450 ZNF460Q14592 562 aa23.87■■□□□ 1.41
HOXC9-201ENST00000303450 LRRC8EQ6NSJ5 796 aa23.87■■□□□ 1.41
HOXC9-201ENST00000303450 TMEM26Q6ZUK4 368 aa23.87■■□□□ 1.41
HOXC9-201ENST00000303450 NEK10Q6ZWH5 1172 aa23.87■■□□□ 1.41
HOXC9-201ENST00000303450 ZNF438Q7Z4V0 828 aa23.87■■□□□ 1.41
HOXC9-201ENST00000303450 ZNF761Q86XN6 746 aaPredicted RBP23.87■■□□□ 1.41
HOXC9-201ENST00000303450 MREGQ8N565 214 aa23.87■■□□□ 1.41
HOXC9-201ENST00000303450 DCAKDQ8WVC6 231 aa23.87■■□□□ 1.41
HOXC9-201ENST00000303450 EEF1AKMT1Q8WVE0 214 aa23.87■■□□□ 1.41
HOXC9-201ENST00000303450 CCDC3Q9BQI4 270 aa23.87■■□□□ 1.41
HOXC9-201ENST00000303450 TRIT1Q9H3H1 467 aaKnown RBP23.87■■□□□ 1.41
HOXC9-201ENST00000303450 POPDC3Q9HBV1 291 aa23.87■■□□□ 1.41
HOXC9-201ENST00000303450 CCDC151A5D8V7 595 aa23.86■■□□□ 1.41
HOXC9-201ENST00000303450 ZW10O43264 779 aa23.86■■□□□ 1.41
HOXC9-201ENST00000303450 SHBGP04278 402 aa23.86■■□□□ 1.41
HOXC9-201ENST00000303450 RPN2P04844 631 aa23.86■■□□□ 1.41
HOXC9-201ENST00000303450 KCNA4P22459 653 aa23.86■■□□□ 1.41
HOXC9-201ENST00000303450 ALDH4A1P30038 563 aa23.86■■□□□ 1.41
HOXC9-201ENST00000303450 GPR3P46089 330 aa23.86■■□□□ 1.41
HOXC9-201ENST00000303450 ILKQ13418 452 aa23.86■■□□□ 1.41
HOXC9-201ENST00000303450 LGSNQ5TDP6 509 aa23.86■■□□□ 1.41
HOXC9-201ENST00000303450 UNC5DQ6UXZ4 953 aa23.86■■□□□ 1.41
HOXC9-201ENST00000303450 Q8N9G6 341 aaPredicted RBP23.86■■□□□ 1.41
HOXC9-201ENST00000303450 OR5AR1Q8NGP9 310 aa23.86■■□□□ 1.41
HOXC9-201ENST00000303450 ZFPM2Q8WW38 1151 aa23.86■■□□□ 1.41
HOXC9-201ENST00000303450 DHRS4Q9BTZ2 278 aa23.86■■□□□ 1.41
HOXC9-201ENST00000303450 UCK1Q9HA47 277 aa23.86■■□□□ 1.41
HOXC9-201ENST00000303450 SYTL2Q9HCH5 934 aa23.86■■□□□ 1.41
HOXC9-201ENST00000303450 GPAMQ9HCL2 828 aa23.86■■□□□ 1.41
HOXC9-201ENST00000303450 SLC24A2Q9UI40 661 aa23.86■■□□□ 1.41
HOXC9-201ENST00000303450 RUVBL2Q9Y230 463 aaKnown RBP23.86■■□□□ 1.41
HOXC9-201ENST00000303450 RFPL3O75679 317 aa23.85■■□□□ 1.41
HOXC9-201ENST00000303450 MPC1LP0DKB6 136 aa23.85■■□□□ 1.41
HOXC9-201ENST00000303450 ZNF37AP17032 561 aaPredicted RBP23.85■■□□□ 1.41
HOXC9-201ENST00000303450 CNTFP26441 200 aa23.85■■□□□ 1.41
HOXC9-201ENST00000303450 GCAP28676 217 aa23.85■■□□□ 1.41
HOXC9-201ENST00000303450 RAB10P61026 200 aa23.85■■□□□ 1.41
HOXC9-201ENST00000303450 GPR18Q14330 331 aa23.85■■□□□ 1.41
HOXC9-201ENST00000303450 PIWIL4Q7Z3Z4 852 aaKnown RBP23.85■■□□□ 1.41
HOXC9-201ENST00000303450 TBC1D21Q8IYX1 336 aa23.85■■□□□ 1.41
HOXC9-201ENST00000303450 OR5K2Q8NHB8 316 aa23.85■■□□□ 1.41
HOXC9-201ENST00000303450 LINGO1Q96FE5 620 aa23.85■■□□□ 1.41
HOXC9-201ENST00000303450 TOR4AQ9NXH8 423 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms