RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 EMC3Q9P0I2 261 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 PHRF1Q9P1Y6 1649 aaKnown RBP7.53□□□□□ -1.2
SF3B3-201ENST00000302516 H0YAE9 185 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 RLN2P04090 185 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 L1CAMP32004 1257 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 SEMA5AQ13591 1074 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 IKBKEQ14164 716 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 PTPN20Q4JDL3 420 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 LINGO2Q7L985 606 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 LRRC70Q7Z2Q7 622 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 TMEM110Q86TL2 294 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 ZNF433Q8N7K0 673 aaPredicted RBP7.53□□□□□ -1.2
SF3B3-201ENST00000302516 ATAD1Q8NBU5 361 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 BRSK1Q8TDC3 778 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 COQ10BQ9H8M1 238 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 PDPK1O15530 556 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 DNTTP04053 509 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 AMD1P17707 334 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 DCKP27707 260 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 TPTEP56180 551 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 ZNF45Q02386 682 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 XKR4Q5GH76 650 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 GPR158Q5T848 1215 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 GPC2Q8N158 579 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 BIRC8Q96P09 236 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 TRNT1Q96Q11 434 aaKnown RBP7.53□□□□□ -1.2
SF3B3-201ENST00000302516 ADAM2Q99965 735 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 ARHGEF4Q9NR80 690 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 PHPT1Q9NRX4 125 aaPredicted RBP7.53□□□□□ -1.2
SF3B3-201ENST00000302516 ASF1AQ9Y294 204 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 STXBP5LQ9Y2K9 1186 aa7.53□□□□□ -1.2
SF3B3-201ENST00000302516 ISPDA4D126 451 aa7.52□□□□□ -1.2
SF3B3-201ENST00000302516 PDLIM1O00151 329 aa7.52□□□□□ -1.2
SF3B3-201ENST00000302516 MID1O15344 667 aa7.52□□□□□ -1.2
SF3B3-201ENST00000302516 PTPRAP18433 802 aa7.52□□□□□ -1.2
SF3B3-201ENST00000302516 CD72P21854 359 aa7.52□□□□□ -1.2
SF3B3-201ENST00000302516 SLC15A1P46059 708 aa7.52□□□□□ -1.2
SF3B3-201ENST00000302516 SCNN1GP51170 649 aa7.52□□□□□ -1.2
SF3B3-201ENST00000302516 XKP51811 444 aa7.52□□□□□ -1.2
SF3B3-201ENST00000302516 GSCP56915 257 aaPredicted RBP7.52□□□□□ -1.2
SF3B3-201ENST00000302516 ZNF155Q12901 538 aaPredicted RBP7.52□□□□□ -1.2
SF3B3-201ENST00000302516 TPGS1Q6ZTW0 290 aa7.52□□□□□ -1.2
SF3B3-201ENST00000302516 OR4K2Q8NGD2 314 aa7.52□□□□□ -1.2
SF3B3-201ENST00000302516 SPPL2BQ8TCT7 592 aa7.52□□□□□ -1.2
SF3B3-201ENST00000302516 CPXM1Q96SM3 734 aa7.52□□□□□ -1.2
SF3B3-201ENST00000302516 SLC30A2Q9BRI3 323 aa7.52□□□□□ -1.2
SF3B3-201ENST00000302516 GPSM3Q9Y4H4 160 aa7.52□□□□□ -1.2
SF3B3-201ENST00000302516 MAP4K5Q9Y4K4 846 aa7.52□□□□□ -1.2
SF3B3-201ENST00000302516 ROBO1Q9Y6N7 1651 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 RGPD2P0DJD1 1756 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 NSG1P42857 185 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 CSTF1Q05048 431 aaKnown RBP7.52□□□□□ -1.21
SF3B3-201ENST00000302516 RD3Q7Z3Z2 195 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 NIFKQ9BYG3 293 aaKnown RBP7.52□□□□□ -1.21
SF3B3-201ENST00000302516 NOCTQ9UK39 431 aaKnown RBP7.52□□□□□ -1.21
SF3B3-201ENST00000302516 RAI2Q9Y5P3 530 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 RGPD1P0DJD0 1748 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 IQCMA0A1B0GVH7 501 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 PRH1P02810 166 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 CBSLP0DN79 551 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 CBSP35520 551 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 GNALP38405 381 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 ATP4BP51164 291 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 CMPK2Q5EBM0 449 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF773Q6PK81 442 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 LRRC69Q6ZNQ3 347 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 GPR65Q8IYL9 337 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 SMG7Q92540 1137 aaKnown RBP7.52□□□□□ -1.21
SF3B3-201ENST00000302516 AZIN2Q96A70 460 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 KLHL5Q96PQ7 755 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 FERD3LQ96RJ6 166 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 HAPLN3Q96S86 360 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 TMEM209Q96SK2 561 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 OR2B2Q9GZK3 357 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 DDX4Q9NQI0 724 aaKnown RBP7.52□□□□□ -1.21
SF3B3-201ENST00000302516 FLRT1Q9NZU1 646 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 EIF3KQ9UBQ5 218 aaKnown RBP7.52□□□□□ -1.21
SF3B3-201ENST00000302516 ERVW-1Q9UQF0 538 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 PCDHGA11Q9Y5H2 935 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 AGPSO00116 658 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 SYN3O14994 580 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 NR2C1P13056 603 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 CD36P16671 472 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 TNFSF9P41273 254 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 IL10RBQ08334 325 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 EFR3AQ14156 821 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 OR10H4Q8NGA5 316 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 ELMO3Q96BJ8 720 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 GPR21Q99679 349 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 MRPL45Q9BRJ2 306 aaKnown RBP7.52□□□□□ -1.21
SF3B3-201ENST00000302516 BHLHE41Q9C0J9 482 aaPredicted RBP7.52□□□□□ -1.21
SF3B3-201ENST00000302516 ADAMTS10Q9H324 1103 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 CDH7Q9ULB5 785 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 C2orf71A6NGG8 1288 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 ARPC2O15144 300 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 BCAS2O75934 225 aaPredicted RBP7.52□□□□□ -1.21
SF3B3-201ENST00000302516 TSPAN8P19075 237 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 PRPS1L1P21108 318 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 KCNA5P22460 613 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 PROZP22891 400 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms