RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 NECTIN4Q96NY8 510 aa21.81■■□□□ 1.08
SMAD1-201ENST00000302085 OR2AG1Q9H205 316 aa21.81■■□□□ 1.08
SMAD1-201ENST00000302085 TICRRQ7Z2Z1 1910 aa21.81■■□□□ 1.08
SMAD1-201ENST00000302085 NPC1O15118 1278 aa21.8■■□□□ 1.08
SMAD1-201ENST00000302085 RNASEH1O60930 286 aaKnown RBP21.8■■□□□ 1.08
SMAD1-201ENST00000302085 LILRB5O75023 590 aa21.8■■□□□ 1.08
SMAD1-201ENST00000302085 HIST1H2AGP0C0S8 130 aaPredicted RBP21.8■■□□□ 1.08
SMAD1-201ENST00000302085 HIST1H2ADP20671 130 aa21.8■■□□□ 1.08
SMAD1-201ENST00000302085 HTR6P50406 440 aa21.8■■□□□ 1.08
SMAD1-201ENST00000302085 PAOXQ6QHF9 649 aa21.8■■□□□ 1.08
SMAD1-201ENST00000302085 DSELQ8IZU8 1212 aa21.8■■□□□ 1.08
SMAD1-201ENST00000302085 PLA2G15Q8NCC3 412 aa21.8■■□□□ 1.08
SMAD1-201ENST00000302085 HIST1H2AHQ96KK5 128 aa21.8■■□□□ 1.08
SMAD1-201ENST00000302085 HIST1H2AJQ99878 128 aa21.8■■□□□ 1.08
SMAD1-201ENST00000302085 H2AFJQ9BTM1 129 aa21.8■■□□□ 1.08
SMAD1-201ENST00000302085 TRIM39Q9HCM9 518 aa21.8■■□□□ 1.08
SMAD1-201ENST00000302085 SERGEFQ9UGK8 458 aa21.8■■□□□ 1.08
SMAD1-201ENST00000302085 IGLON5A6NGN9 336 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 SYNCRIPO60506 623 aaKnown RBP21.79■■□□□ 1.08
SMAD1-201ENST00000302085 CCND1P24385 295 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 BCL7AQ4VC05 210 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 OGFOD2Q6N063 350 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 KIAA1211LQ6NV74 962 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 OR9I1Q8NGQ6 314 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 MCOLN3Q8TDD5 553 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 TMEM159Q96B96 161 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 NPAS2Q99743 824 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 EFCAB1Q9HAE3 211 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 CCDC167Q9P0B6 97 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 ATXN10Q9UBB4 475 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 GULP1Q9UBP9 304 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 NKX1-2Q9UD57 310 aaPredicted RBP21.79■■□□□ 1.08
SMAD1-201ENST00000302085 CKAP5Q14008 2032 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 KRT87PA6NCN2 255 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 EPORP19235 508 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 CYP2A7P20853 494 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 C5AR1P21730 350 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 TBL3Q12788 808 aaKnown RBP21.79■■□□□ 1.08
SMAD1-201ENST00000302085 SYTL3Q4VX76 610 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 TTC23LQ6PF05 361 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 Q6ZSR9 355 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 NET1Q7Z628 596 aaPredicted RBP21.79■■□□□ 1.08
SMAD1-201ENST00000302085 FUNDC1Q8IVP5 155 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 TCAIMQ8N3R3 496 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 HDDC3Q8N4P3 179 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 MAGEC3Q8TD91 643 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 GLMNQ92990 594 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 CCT7Q99832 543 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 NTMT1Q9BV86 223 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 TTYH1Q9H313 450 aaPredicted RBP21.79■■□□□ 1.08
SMAD1-201ENST00000302085 SLC32A1Q9H598 525 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 PFDN4Q9NQP4 134 aa21.79■■□□□ 1.08
SMAD1-201ENST00000302085 LOC730098B7Z3J9 87 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 AP1G1O43747 822 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 ADH1BP00325 375 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 EPB42P16452 691 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 PBLDP30039 288 aaPredicted RBP21.78■■□□□ 1.08
SMAD1-201ENST00000302085 CTHP32929 405 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 ACADVLP49748 655 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 RPS14P62263 151 aaKnown RBP21.78■■□□□ 1.08
SMAD1-201ENST00000302085 SPATA19Q7Z5L4 167 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 EFCAB3Q8N7B9 438 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 FOXJ1Q92949 421 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 A0A1W2PP55 124 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 FBP2O00757 339 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 PSIP1O75475 530 aaKnown RBP21.78■■□□□ 1.08
SMAD1-201ENST00000302085 SORBS2O94875 1100 aaKnown RBP21.78■■□□□ 1.08
SMAD1-201ENST00000302085 SNRPB2P08579 225 aaKnown RBP21.78■■□□□ 1.08
SMAD1-201ENST00000302085 GSTM1P09488 218 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 PDHA2P29803 388 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 SLC6A12P48065 614 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 HNMTP50135 292 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 NME5P56597 212 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 STX1BP61266 288 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 GSTM4Q03013 218 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 E2F5Q15329 346 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 MAPRE2Q15555 327 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 IL27RAQ6UWB1 636 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 C16orf89Q6UX73 402 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 CFAP61Q8NHU2 1237 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 ZCCHC2Q9C0B9 1178 aaKnown RBP21.78■■□□□ 1.08
SMAD1-201ENST00000302085 CD248Q9HCU0 757 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 RNF11Q9Y3C5 154 aa21.78■■□□□ 1.08
SMAD1-201ENST00000302085 ATG2BQ96BY7 2078 aa21.77■■□□□ 1.08
SMAD1-201ENST00000302085 ARHGEF33A8MVX0 844 aa21.77■■□□□ 1.08
SMAD1-201ENST00000302085 CIB2O75838 187 aa21.77■■□□□ 1.08
SMAD1-201ENST00000302085 PDE5AO76074 875 aa21.77■■□□□ 1.08
SMAD1-201ENST00000302085 PCDH8O95206 1070 aa21.77■■□□□ 1.08
SMAD1-201ENST00000302085 ZNF8P17098 575 aaPredicted RBP21.77■■□□□ 1.08
SMAD1-201ENST00000302085 DIO3P55073 304 aa21.77■■□□□ 1.08
SMAD1-201ENST00000302085 AP1S2P56377 157 aa21.77■■□□□ 1.08
SMAD1-201ENST00000302085 KIF19Q2TAC6 998 aa21.77■■□□□ 1.08
SMAD1-201ENST00000302085 TMEM196Q5HYL7 178 aa21.77■■□□□ 1.08
SMAD1-201ENST00000302085 PNCKQ6P2M8 343 aa21.77■■□□□ 1.08
SMAD1-201ENST00000302085 SLC22A15Q8IZD6 547 aa21.77■■□□□ 1.08
SMAD1-201ENST00000302085 SFRP1Q8N474 314 aa21.77■■□□□ 1.08
SMAD1-201ENST00000302085 HIC2Q96JB3 615 aa21.77■■□□□ 1.08
SMAD1-201ENST00000302085 PRO3102Q9H379 93 aa21.77■■□□□ 1.08
SMAD1-201ENST00000302085 RNPEPL1Q9HAU8 725 aa21.77■■□□□ 1.08
SMAD1-201ENST00000302085 SDR39U1Q9NRG7 319 aaPredicted RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms