RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 IGSF6O95976 241 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 AGXTP21549 392 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 GABRR2P28476 465 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 MAPK1P28482 360 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 EPHB3P54753 998 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 YBEYP58557 167 aaPredicted RBP13.07□□□□□ -0.32
CASC4-201ENST00000299957 CAMK2GQ13555 558 aaPredicted RBP13.07□□□□□ -0.32
CASC4-201ENST00000299957 NPTX1Q15818 432 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 INO80DQ53TQ3 878 aaPredicted RBP13.07□□□□□ -0.32
CASC4-201ENST00000299957 CYS1Q717R9 158 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 SLC24A5Q71RS6 500 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 P2RY8Q86VZ1 359 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 ARHGAP12Q8IWW6 846 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 TERB1Q8NA31 727 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 TTC29Q8NA56 475 aaPredicted RBP13.07□□□□□ -0.32
CASC4-201ENST00000299957 COL26A1Q96A83 441 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 IL4I1Q96RQ9 567 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 DPH2Q9BQC3 489 aaPredicted RBP13.07□□□□□ -0.32
CASC4-201ENST00000299957 CCM2LQ9NUG4 571 aaPredicted RBP13.07□□□□□ -0.32
CASC4-201ENST00000299957 GJD2Q9UKL4 321 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 TLR6Q9Y2C9 796 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 ANKRD66B4E2M5 251 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 IL1BP01584 269 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 TUFMP49411 452 aaKnown RBP13.07□□□□□ -0.32
CASC4-201ENST00000299957 UPP1Q16831 310 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 AAK1Q2M2I8 961 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 RFTN2Q52LD8 501 aaPredicted RBP13.07□□□□□ -0.32
CASC4-201ENST00000299957 SULT1C3Q6IMI6 304 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 IMP4Q96G21 291 aaKnown RBP13.07□□□□□ -0.32
CASC4-201ENST00000299957 TTPALQ9BTX7 342 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 BOCQ9BWV1 1114 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 PRRG3Q9BZD7 231 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 SMOC2Q9H3U7 446 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 HIPK3Q9H422 1215 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 TFB2MQ9H5Q4 396 aaKnown RBP13.07□□□□□ -0.32
CASC4-201ENST00000299957 RPF2Q9H7B2 306 aaKnown RBP13.07□□□□□ -0.32
CASC4-201ENST00000299957 LAMB1P07942 1786 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 FAM234BA2RU67 622 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 SNPHO15079 494 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 ATE1O95260 518 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 PGRP06401 933 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 OR1E2P47887 323 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 LEPRP48357 1165 aaKnown RBP13.07□□□□□ -0.32
CASC4-201ENST00000299957 NKX2-5P52952 324 aaPredicted RBP13.07□□□□□ -0.32
CASC4-201ENST00000299957 BTG3Q14201 252 aaPredicted RBP13.07□□□□□ -0.32
CASC4-201ENST00000299957 ABRAXAS2Q15018 415 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 SPRYD7Q5W111 196 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 CES5AQ6NT32 575 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 FUT10Q6P4F1 479 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 SMYD1Q8NB12 490 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 PHF10Q8WUB8 498 aaKnown RBP13.07□□□□□ -0.32
CASC4-201ENST00000299957 KAT2AQ92830 837 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 ART5Q96L15 291 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 TCF25Q9BQ70 676 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 HERC2P3Q9BVR0 1158 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 SMG9Q9H0W8 520 aaKnown RBP13.07□□□□□ -0.32
CASC4-201ENST00000299957 PCDHB3Q9Y5E6 796 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 COL22A1Q8NFW1 1626 aaPredicted RBP13.07□□□□□ -0.32
CASC4-201ENST00000299957 BTAF1O14981 1849 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 DNAJC25-GNG10A0A024R161 153 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 A8MV72 311 aaPredicted RBP13.06□□□□□ -0.32
CASC4-201ENST00000299957 UBFD1O14562 309 aaKnown RBP13.06□□□□□ -0.32
CASC4-201ENST00000299957 GABRDO14764 452 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 TNNI3P19429 210 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 VARSP26640 1264 aaKnown RBP13.06□□□□□ -0.32
CASC4-201ENST00000299957 RRM2P31350 389 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 SOX6P35712 828 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 RPS14P62263 151 aaKnown RBP13.06□□□□□ -0.32
CASC4-201ENST00000299957 PURAQ00577 322 aaKnown RBP13.06□□□□□ -0.32
CASC4-201ENST00000299957 MYBPC3Q14896 1274 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 CYP2A13Q16696 494 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 DEF8Q6ZN54 512 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 RD3Q7Z3Z2 195 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 NANOGNBQ7Z5D8 188 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 SCD5Q86SK9 330 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 HM13Q8TCT9 377 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 RBM4BQ9BQ04 359 aaKnown RBP13.06□□□□□ -0.32
CASC4-201ENST00000299957 RBM4Q9BWF3 364 aaKnown RBP13.06□□□□□ -0.32
CASC4-201ENST00000299957 TDRD1Q9BXT4 1180 aaKnown RBP13.06□□□□□ -0.32
CASC4-201ENST00000299957 BRD9Q9H8M2 597 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 MAGEE1Q9HCI5 957 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 MALT1Q9UDY8 824 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 PGAP2Q9UHJ9 254 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 SUV39H1O43463 412 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 RGS10O43665 173 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 CLDN11O75508 207 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 DDX5P17844 614 aaKnown RBP13.06□□□□□ -0.32
CASC4-201ENST00000299957 RPS7P62081 194 aaKnown RBP13.06□□□□□ -0.32
CASC4-201ENST00000299957 PCBP1Q15365 356 aaKnown RBP eCLIP13.06□□□□□ -0.32
CASC4-201ENST00000299957 CHRNA6Q15825 494 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 HIST2H2ACQ16777 129 aaPredicted RBP13.06□□□□□ -0.32
CASC4-201ENST00000299957 HIST2H2AA3Q6FI13 130 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 GOLGA7Q7Z5G4 137 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 SLC34A3Q8N130 599 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 SVOPQ8N4V2 548 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 RELTQ969Z4 430 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 IL12RB2Q99665 862 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 GPR62Q9BZJ7 368 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 RHCGQ9UBD6 479 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 OR10H3O60404 316 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms