RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 ZNF548Q8NEK5 533 aaPredicted RBP13.36□□□□□ -0.27
BCCIP-202ENST00000299130 PDZD8Q8NEN9 1154 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 OR2T12Q8NG77 320 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 RNF217Q8TC41 542 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 ALG14Q96F25 216 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 CLSTN3Q9BQT9 956 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 THUMPD3Q9BV44 507 aaKnown RBP13.36□□□□□ -0.27
BCCIP-202ENST00000299130 ABCG8Q9H221 673 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 TOR3AQ9H497 397 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 TMEM45AQ9NWC5 275 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 RHBDL2Q9NX52 303 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 MTRRQ9UBK8 725 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.36□□□□□ -0.27
BCCIP-202ENST00000299130 LIMD1Q9UGP4 676 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 ZNHIT2Q9UHR6 403 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 OARD1Q9Y530 152 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 PCDHB1Q9Y5F3 818 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 C1orf232A0A0U1RR37 186 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.36□□□□□ -0.27
BCCIP-202ENST00000299130 DYTNA2CJ06 578 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 LOC730098B7Z3J9 87 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 H0YAE9 185 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 IL7RP16871 459 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 TUFMP49411 452 aaKnown RBP13.36□□□□□ -0.27
BCCIP-202ENST00000299130 NUP107P57740 925 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 CHRNB3Q05901 458 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 CYP4F3Q08477 520 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 ELAVL2Q12926 359 aaKnown RBP13.36□□□□□ -0.27
BCCIP-202ENST00000299130 TMED1Q13445 227 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 NFATC2Q13469 925 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 FAM98BQ52LJ0 330 aaKnown RBP13.36□□□□□ -0.27
BCCIP-202ENST00000299130 ARMC12Q5T9G4 340 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 NPAS4Q8IUM7 802 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 RGL4Q8IZJ4 473 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 ADGRG2Q8IZP9 1017 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 OR8J3Q8NGG0 315 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 SLC22A17Q8WUG5 538 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 TANKQ92844 425 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 RHBDF1Q96CC6 855 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 DOK1Q99704 481 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 CD244Q9BZW8 370 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 ADGRE2Q9UHX3 823 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 CDH7Q9ULB5 785 aa13.36□□□□□ -0.27
BCCIP-202ENST00000299130 ZNF701M0R085 212 aaPredicted RBP13.35□□□□□ -0.27
BCCIP-202ENST00000299130 TULP3O75386 442 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 DEAF1O75398 565 aaPredicted RBP13.35□□□□□ -0.27
BCCIP-202ENST00000299130 THRBP10828 461 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 ZNF7P17097 686 aaPredicted RBP13.35□□□□□ -0.27
BCCIP-202ENST00000299130 PHC1P78364 1004 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 INO80DQ53TQ3 878 aaPredicted RBP13.35□□□□□ -0.27
BCCIP-202ENST00000299130 TMEM179BQ7Z7N9 219 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 ZSWIM9Q86XI8 627 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 OR10Q1Q8NGQ4 319 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 ADAMTS19Q8TE59 1207 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 AURKBQ96GD4 344 aaPredicted RBP13.35□□□□□ -0.27
BCCIP-202ENST00000299130 PPP3R2Q96LZ3 170 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 MBOAT4Q96T53 435 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 FAM126AQ9BYI3 521 aaPredicted RBP13.35□□□□□ -0.27
BCCIP-202ENST00000299130 FANCEQ9HB96 536 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 ZFYVE1Q9HBF4 777 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 WWOXQ9NZC7 414 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 ZNF490Q9ULM2 529 aaPredicted RBP13.35□□□□□ -0.27
BCCIP-202ENST00000299130 ANGPTL3Q9Y5C1 460 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 GSTA4O15217 222 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 SEC22BO75396 215 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 BPIP17213 487 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 PRKACGP22612 351 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 EEF1B2P24534 225 aaKnown RBP13.35□□□□□ -0.27
BCCIP-202ENST00000299130 HNF1BP35680 557 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 PIGAP37287 484 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 SMAD3P84022 425 aaKnown RBP13.35□□□□□ -0.27
BCCIP-202ENST00000299130 PIGFQ07326 219 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 C16orf72Q14CZ0 275 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 CHRNA6Q15825 494 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 MAPKAPK3Q16644 382 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 CDKN3Q16667 212 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 GPRC6AQ5T6X5 926 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 SULT1C3Q6IMI6 304 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 XKR5Q6UX68 686 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 CERS6Q6ZMG9 384 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 PRR23BQ6ZRT6 265 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 TMEM150AQ86TG1 271 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 TSPAN33Q86UF1 283 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 NAT16Q8N8M0 369 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 OVCA2Q8WZ82 227 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 ABTB1Q969K4 478 aaPredicted RBP13.35□□□□□ -0.27
BCCIP-202ENST00000299130 DPY30Q9C005 99 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 AMBRA1Q9C0C7 1298 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 OPTCQ9UBM4 332 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 GNPTGQ9UJJ9 305 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 CLEC4EQ9ULY5 219 aa13.35□□□□□ -0.27
BCCIP-202ENST00000299130 RGS14O43566 566 aa13.34□□□□□ -0.27
BCCIP-202ENST00000299130 GREM1O60565 184 aa13.34□□□□□ -0.27
BCCIP-202ENST00000299130 PFDN1O60925 122 aa13.34□□□□□ -0.27
BCCIP-202ENST00000299130 PRKD3O94806 890 aa13.34□□□□□ -0.27
BCCIP-202ENST00000299130 C1QCP02747 245 aa13.34□□□□□ -0.27
BCCIP-202ENST00000299130 MBL2P11226 248 aaPredicted RBP13.34□□□□□ -0.27
BCCIP-202ENST00000299130 RPS3P23396 243 aaKnown RBP eCLIP13.34□□□□□ -0.27
BCCIP-202ENST00000299130 ACRV1P26436 265 aa13.34□□□□□ -0.27
BCCIP-202ENST00000299130 XAF1Q6GPH4 301 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms