RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CD151P48509 253 aa20.67■□□□□ 0.9
SMCO4-201ENST00000298966 SRP54P61011 504 aaKnown RBP20.67■□□□□ 0.9
SMCO4-201ENST00000298966 ELP6Q0PNE2 266 aa20.67■□□□□ 0.9
SMCO4-201ENST00000298966 ARHGEF7Q14155 803 aa20.67■□□□□ 0.9
SMCO4-201ENST00000298966 LRRC14Q15048 493 aa20.67■□□□□ 0.9
SMCO4-201ENST00000298966 FASTKD1Q53R41 847 aaKnown RBP20.67■□□□□ 0.9
SMCO4-201ENST00000298966 PHF19Q5T6S3 580 aa20.67■□□□□ 0.9
SMCO4-201ENST00000298966 ZNF470Q6ECI4 717 aa20.67■□□□□ 0.9
SMCO4-201ENST00000298966 LYSMD3Q7Z3D4 306 aa20.67■□□□□ 0.9
SMCO4-201ENST00000298966 ZSWIM9Q86XI8 627 aa20.67■□□□□ 0.9
SMCO4-201ENST00000298966 OR13C4Q8NGS5 318 aa20.67■□□□□ 0.9
SMCO4-201ENST00000298966 ISL2Q96A47 359 aa20.67■□□□□ 0.9
SMCO4-201ENST00000298966 TTC1Q99614 292 aa20.67■□□□□ 0.9
SMCO4-201ENST00000298966 SELENOSQ9BQE4 189 aa20.67■□□□□ 0.9
SMCO4-201ENST00000298966 MCMBPQ9BTE3 642 aa20.67■□□□□ 0.9
SMCO4-201ENST00000298966 CAPS2Q9BXY5 557 aa20.67■□□□□ 0.9
SMCO4-201ENST00000298966 B3GNT4Q9C0J1 378 aa20.67■□□□□ 0.9
SMCO4-201ENST00000298966 INTS10Q9NVR2 710 aaKnown RBP20.67■□□□□ 0.9
SMCO4-201ENST00000298966 MKS1Q9NXB0 559 aa20.67■□□□□ 0.9
SMCO4-201ENST00000298966 NFKBIL1Q9UBC1 381 aaPredicted RBP20.67■□□□□ 0.9
SMCO4-201ENST00000298966 NOTCH2Q04721 2471 aa20.67■□□□□ 0.9
SMCO4-201ENST00000298966 SDK2Q58EX2 2172 aa20.66■□□□□ 0.9
SMCO4-201ENST00000298966 CCDC78A2IDD5 438 aa20.66■□□□□ 0.9
SMCO4-201ENST00000298966 CCDC162PA2VCL2 907 aa20.66■□□□□ 0.9
SMCO4-201ENST00000298966 PSMD11O00231 422 aa20.66■□□□□ 0.9
SMCO4-201ENST00000298966 CD3EAPO15446 510 aaKnown RBP20.66■□□□□ 0.9
SMCO4-201ENST00000298966 GOT2P00505 430 aaKnown RBP20.66■□□□□ 0.9
SMCO4-201ENST00000298966 TNFP01375 233 aa20.66■□□□□ 0.9
SMCO4-201ENST00000298966 KCNAB2Q13303 367 aa20.66■□□□□ 0.9
SMCO4-201ENST00000298966 TYSND1Q2T9J0 566 aa20.66■□□□□ 0.9
SMCO4-201ENST00000298966 CERS6Q6ZMG9 384 aa20.66■□□□□ 0.9
SMCO4-201ENST00000298966 DPPA4Q7L190 304 aa20.66■□□□□ 0.9
SMCO4-201ENST00000298966 SPRED1Q7Z699 444 aa20.66■□□□□ 0.9
SMCO4-201ENST00000298966 CCDC91Q7Z6B0 441 aa20.66■□□□□ 0.9
SMCO4-201ENST00000298966 CILP2Q8IUL8 1156 aa20.66■□□□□ 0.9
SMCO4-201ENST00000298966 SLITRK4Q8IW52 837 aa20.66■□□□□ 0.9
SMCO4-201ENST00000298966 OTUD6BQ8N6M0 293 aa20.66■□□□□ 0.9
SMCO4-201ENST00000298966 JPH3Q8WXH2 748 aaPredicted RBP20.66■□□□□ 0.9
SMCO4-201ENST00000298966 AGAP2Q99490 1192 aa20.66■□□□□ 0.9
SMCO4-201ENST00000298966 APOOQ9BUR5 198 aa20.66■□□□□ 0.9
SMCO4-201ENST00000298966 SLC12A9Q9BXP2 914 aa20.66■□□□□ 0.9
SMCO4-201ENST00000298966 PKD2L2Q9NZM6 624 aa20.66■□□□□ 0.9
SMCO4-201ENST00000298966 KCTD3Q9Y597 815 aa20.66■□□□□ 0.9
SMCO4-201ENST00000298966 STMND1H3BQB6 276 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 AURKAO14965 403 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 UGT1A9O60656 530 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 TIMP2P16035 220 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 SPAM1P38567 509 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 SLC1A2P43004 574 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 TTPAP49638 278 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 SERPINB8P50452 374 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 ARSDP51689 593 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 FOXK1P85037 733 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 SLC18A2Q05940 514 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 WSCD2Q2TBF2 565 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 GPR33Q49SQ1 333 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 LYPLAL1Q5VWZ2 237 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 LCA5Q86VQ0 697 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 ZC3HC1Q86WB0 502 aaKnown RBP20.65■□□□□ 0.9
SMCO4-201ENST00000298966 VPS39Q96JC1 886 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 WDR92Q96MX6 357 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 PLEKHG4BQ96PX9 1271 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 GPR22Q99680 433 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 UGT1A7Q9HAW7 530 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 UGT1A10Q9HAW8 530 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 UGT1A8Q9HAW9 530 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 B4GALT6Q9UBX8 382 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 TUBD1Q9UJT1 453 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 COQ6Q9Y2Z9 468 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 PSAT1Q9Y617 370 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 SLC30A1Q9Y6M5 507 aa20.65■□□□□ 0.9
SMCO4-201ENST00000298966 USP9XQ93008 2570 aaPredicted RBP20.65■□□□□ 0.9
SMCO4-201ENST00000298966 SPTBN1Q01082 2364 aaKnown RBP20.65■□□□□ 0.9
SMCO4-201ENST00000298966 MYO9AB2RTY4 2548 aa20.64■□□□□ 0.9
SMCO4-201ENST00000298966 TMEM120BA0PK00 339 aa20.64■□□□□ 0.89
SMCO4-201ENST00000298966 NPIPB15A6NHN6 443 aaPredicted RBP20.64■□□□□ 0.89
SMCO4-201ENST00000298966 CCNFP41002 786 aa20.64■□□□□ 0.89
SMCO4-201ENST00000298966 POLE2P56282 527 aa20.64■□□□□ 0.89
SMCO4-201ENST00000298966 CACNG1Q06432 222 aa20.64■□□□□ 0.89
SMCO4-201ENST00000298966 TERF2Q15554 542 aa20.64■□□□□ 0.89
SMCO4-201ENST00000298966 TMEM52BQ4KMG9 183 aa20.64■□□□□ 0.89
SMCO4-201ENST00000298966 C14orf28Q4W4Y0 310 aa20.64■□□□□ 0.89
SMCO4-201ENST00000298966 OGFOD3Q6PK18 319 aa20.64■□□□□ 0.89
SMCO4-201ENST00000298966 TAF8Q7Z7C8 310 aa20.64■□□□□ 0.89
SMCO4-201ENST00000298966 FAM46DQ8NEK8 389 aa20.64■□□□□ 0.89
SMCO4-201ENST00000298966 KCTD5Q9NXV2 234 aa20.64■□□□□ 0.89
SMCO4-201ENST00000298966 IL1RAPL1Q9NZN1 696 aa20.64■□□□□ 0.89
SMCO4-201ENST00000298966 LRIT1Q9P2V4 623 aa20.64■□□□□ 0.89
SMCO4-201ENST00000298966 ANAPC2Q9UJX6 822 aa20.64■□□□□ 0.89
SMCO4-201ENST00000298966 ARHGEF17Q96PE2 2063 aaPredicted RBP20.63■□□□□ 0.89
SMCO4-201ENST00000298966 A0A1W2PPM1 405 aa20.63■□□□□ 0.89
SMCO4-201ENST00000298966 FOXO6A8MYZ6 492 aa20.63■□□□□ 0.89
SMCO4-201ENST00000298966 CLDN7O95471 211 aa20.63■□□□□ 0.89
SMCO4-201ENST00000298966 AHSGP02765 367 aa20.63■□□□□ 0.89
SMCO4-201ENST00000298966 CHN1P15882 459 aa20.63■□□□□ 0.89
SMCO4-201ENST00000298966 CREB1P16220 341 aa20.63■□□□□ 0.89
SMCO4-201ENST00000298966 KRT4P19013 534 aa20.63■□□□□ 0.89
SMCO4-201ENST00000298966 ITGALP20701 1170 aa20.63■□□□□ 0.89
SMCO4-201ENST00000298966 MC4RP32245 332 aa20.63■□□□□ 0.89
SMCO4-201ENST00000298966 FOXN2P32314 431 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms