RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 OR4K2Q8NGD2 314 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 UBE2FQ969M7 185 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 KIAA1191Q96A73 305 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 ATOH8Q96SQ7 321 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 CARS2Q9HA77 564 aaKnown RBP11.22□□□□□ -0.61
TRUB1-201ENST00000298746 PKP3Q9Y446 797 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 IPPQ9Y573 584 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 UPK1AO00322 258 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 MGEA5O60502 916 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 CREG1O75629 220 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 GJB3O75712 270 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 LRATO95237 230 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 HAPLN1P10915 354 aaPredicted RBP11.22□□□□□ -0.61
TRUB1-201ENST00000298746 FDXRP22570 491 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 SLC26A3P40879 764 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 NUDT6P53370 316 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 KRR1Q13601 381 aaKnown RBP11.22□□□□□ -0.61
TRUB1-201ENST00000298746 ACOX1Q15067 660 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 NKG7Q16617 165 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 PLEKHG6Q3KR16 790 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 PM20D1Q6GTS8 502 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 CES5AQ6NT32 575 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 GPR153Q6NV75 609 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 B3GNT8Q7Z7M8 397 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 RIMKLAQ8IXN7 391 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.22□□□□□ -0.61
TRUB1-201ENST00000298746 ZNF583Q96ND8 569 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 KCNS3Q9BQ31 491 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 TSEN34Q9BSV6 310 aaKnown RBP11.22□□□□□ -0.61
TRUB1-201ENST00000298746 SMPD4Q9NXE4 827 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 PCDHGA10Q9Y5H3 936 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 MCM3APO60318 1980 aa11.22□□□□□ -0.61
TRUB1-201ENST00000298746 COL11A1P12107 1806 aaPredicted RBP11.21□□□□□ -0.61
TRUB1-201ENST00000298746 ZW10O43264 779 aa11.21□□□□□ -0.61
TRUB1-201ENST00000298746 RPP40O75818 363 aaKnown RBP11.21□□□□□ -0.61
TRUB1-201ENST00000298746 LRIT3Q3SXY7 679 aa11.21□□□□□ -0.61
TRUB1-201ENST00000298746 RFTN2Q52LD8 501 aaPredicted RBP11.21□□□□□ -0.61
TRUB1-201ENST00000298746 ZNF691Q5VV52 312 aa11.21□□□□□ -0.61
TRUB1-201ENST00000298746 PPP2R2DQ66LE6 453 aa11.21□□□□□ -0.61
TRUB1-201ENST00000298746 TMEM179BQ7Z7N9 219 aa11.21□□□□□ -0.61
TRUB1-201ENST00000298746 CELF2-AS1Q8N7Q2 184 aa11.21□□□□□ -0.61
TRUB1-201ENST00000298746 LILRB4Q8NHJ6 448 aa11.21□□□□□ -0.61
TRUB1-201ENST00000298746 LPPQ93052 612 aa11.21□□□□□ -0.61
TRUB1-201ENST00000298746 CDK5RAP1Q96SZ6 601 aaKnown RBP11.21□□□□□ -0.61
TRUB1-201ENST00000298746 COPS4Q9BT78 406 aa11.21□□□□□ -0.61
TRUB1-201ENST00000298746 AARSD1Q9BTE6 412 aaKnown RBP11.21□□□□□ -0.61
TRUB1-201ENST00000298746 PIM2Q9P1W9 311 aa11.21□□□□□ -0.61
TRUB1-201ENST00000298746 KIAA1522Q9P206 1035 aaPredicted RBP11.21□□□□□ -0.61
TRUB1-201ENST00000298746 DKK3Q9UBP4 350 aa11.21□□□□□ -0.61
TRUB1-201ENST00000298746 VPS4AQ9UN37 437 aa11.21□□□□□ -0.61
TRUB1-201ENST00000298746 TTC3P53804 2025 aa11.21□□□□□ -0.61
TRUB1-201ENST00000298746 EVPLLA8MZ36 301 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 SOCS7O14512 581 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 GABRDO14764 452 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 TLR5O60602 858 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 MZF1P28698 734 aaPredicted RBP11.21□□□□□ -0.62
TRUB1-201ENST00000298746 CLCNKBP51801 687 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 EFEMP1Q12805 493 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 PON2Q15165 354 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 TAB1Q15750 504 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 C18orf21Q32NC0 220 aaPredicted RBP11.21□□□□□ -0.62
TRUB1-201ENST00000298746 GLT6D1Q7Z4J2 308 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 UBE2J2Q8N2K1 259 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 RTL3Q8N8U3 475 aaKnown RBP11.21□□□□□ -0.62
TRUB1-201ENST00000298746 UBASH3BQ8TF42 649 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 EEF1AKMT1Q8WVE0 214 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 NUSAP1Q9BXS6 441 aaKnown RBP11.21□□□□□ -0.62
TRUB1-201ENST00000298746 PDGFDQ9GZP0 370 aaPredicted RBP11.21□□□□□ -0.62
TRUB1-201ENST00000298746 ADPRHL2Q9NX46 363 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 IQCF5A8MTL0 148 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 GPR182O15218 404 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 IRAK2O43187 625 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 DNAJB5O75953 348 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 SCELO95171 688 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 SERPINF2P08697 491 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 DARSP14868 501 aaKnown RBP11.21□□□□□ -0.62
TRUB1-201ENST00000298746 SPNP16150 400 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 CYP2C18P33260 490 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 SOX6P35712 828 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 EIF2DP41214 584 aaKnown RBP11.21□□□□□ -0.62
TRUB1-201ENST00000298746 CASP3P42574 277 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 PPP2R2BQ00005 443 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 NFKB2Q00653 900 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 TIGD6Q17RP2 521 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 ZCCHC8Q6NZY4 707 aaKnown RBP11.21□□□□□ -0.62
TRUB1-201ENST00000298746 NKAPQ8N5F7 415 aaKnown RBP11.21□□□□□ -0.62
TRUB1-201ENST00000298746 KRTCAP2Q8N6L1 136 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 DYNC2LI1Q8TCX1 351 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 SPATA17Q96L03 361 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 TSSK3Q96PN8 268 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 SLX1AQ9BQ83 275 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 TTYH2Q9BSA4 534 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 PRRG3Q9BZD7 231 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 CCNB1IP1Q9NPC3 277 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 POLR3BQ9NW08 1133 aaPredicted RBP11.21□□□□□ -0.62
TRUB1-201ENST00000298746 ZNF639Q9UID6 485 aa11.21□□□□□ -0.62
TRUB1-201ENST00000298746 RGPD3A6NKT7 1758 aaPredicted RBP11.2□□□□□ -0.62
TRUB1-201ENST00000298746 RGPD4Q7Z3J3 1758 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.2□□□□□ -0.62
TRUB1-201ENST00000298746 KRT87PA6NCN2 255 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms