RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 COL4A4P53420 1690 aaPredicted RBP13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 ZSCAN5BA6NJL1 495 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 ARHGAP33O14559 1287 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 DSCR3O14972 297 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 ANKRD28O15084 1053 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 DFNA5O60443 496 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 MFN2O95140 757 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 SCELO95171 688 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 DDX5P17844 614 aaKnown RBP13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 MSH3P20585 1137 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 RACK1P63244 317 aaKnown RBP13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 CXCL9Q07325 125 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 PLA2G4EQ3MJ16 856 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 RAB41Q5JT25 222 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 TIGD7Q6NT04 549 aaPredicted RBP13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 SHQ1Q6PI26 577 aaKnown RBP13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 Q6ZSR9 355 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 TAC4Q86UU9 113 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 UBQLNLQ8IYU4 475 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 OR10A6Q8NH74 314 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 STAG3L4Q8TBR4 150 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 EDEM1Q92611 657 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 FAM162AQ96A26 154 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 MED10Q9BTT4 135 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 CDADC1Q9BWV3 514 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 OSER1Q9NX31 292 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 U3KQV3 271 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 PDZK1P1A8MUH7 402 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 CXCR6O00574 342 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 STX16O14662 325 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 ZW10O43264 779 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 AIREO43918 545 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 TMCC2O75069 709 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 RECQL4O94761 1208 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 MLYCDO95822 493 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 RETP07949 1114 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 SLC2A3P11169 496 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 ALOX12P18054 663 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 EFNA1P20827 205 aaPredicted RBP13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 HMGB2P26583 209 aaKnown RBP13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 HOXC13P31276 330 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 LIPAP38571 399 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 ETV3P41162 512 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 NRIP1P48552 1158 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 DGKQP52824 942 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 DEFA1P59665 94 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 DEFA3P59666 94 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 GNG2P59768 71 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 PON2Q15165 354 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 SMN1Q16637 294 aaKnown RBP13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 SLC27A1Q6PCB7 646 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 GALNT5Q7Z7M9 940 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 GPR149Q86SP6 731 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 FBXO16Q8IX29 292 aaPredicted RBP13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 SYTL1Q8IYJ3 562 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 SLC25A51Q9H1U9 297 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 IKZF5Q9H5V7 419 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 ITM2CQ9NQX7 267 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 DCAF13Q9NV06 445 aaKnown RBP13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 CCDC59Q9P031 241 aaKnown RBP13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 PCTPQ9UKL6 214 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 IKZF3Q9UKT9 509 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 RNF112Q9ULX5 631 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 KCNH4Q9UQ05 1017 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 CAB39Q9Y376 341 aaPredicted RBP13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 MAU2Q9Y6X3 613 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 ELOVL7A1L3X0 281 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 SSX4O60224 188 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 FAM20BO75063 409 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 ECI2O75521 394 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 G6PDP11413 515 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 PPP3CCP48454 512 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 OR2B6P58173 313 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 CYP4F3Q08477 520 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 SIM2Q14190 667 aaPredicted RBP13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 MAD2L1BPQ15013 274 aaPredicted RBP13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 KIAA0040Q15053 153 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 SV2CQ496J9 727 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 HABP4Q5JVS0 413 aaKnown RBP13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 UTS2BQ765I0 119 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 LRRC8DQ7L1W4 858 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 UBE2Q1Q7Z7E8 422 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 MICU2Q8IYU8 434 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 TOP6BLQ8N6T0 577 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 AMER2Q8N7J2 671 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 IPCEF1Q8WWN9 437 aaPredicted RBP13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 RASSF5Q8WWW0 418 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 SMOQ99835 787 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 DERL2Q9GZP9 239 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 RIBC2Q9H4K1 309 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 VNN3Q9NY84 501 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 ZMAT5Q9UDW3 170 aaKnown RBP13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 AGO1Q9UL18 857 aaKnown RBP13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 CDH9Q9ULB4 789 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 PCDHGB6Q9Y5F9 930 aa13.27□□□□□ -0.29
RPUSD4-201ENST00000298317 KLK8O60259 260 aa13.26□□□□□ -0.29
RPUSD4-201ENST00000298317 APOA1P02647 267 aa13.26□□□□□ -0.29
RPUSD4-201ENST00000298317 CYP4B1P13584 511 aa13.26□□□□□ -0.29
RPUSD4-201ENST00000298317 IL1RNP18510 177 aa13.26□□□□□ -0.29
RPUSD4-201ENST00000298317 S100A5P33763 92 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms