RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 FAM107BQ9H098 131 aa24.08■■□□□ 1.44
GTF2A1-201ENST00000298173 PTBP2Q9UKA9 531 aaKnown RBP24.08■■□□□ 1.44
GTF2A1-201ENST00000298173 LRP4O75096 1905 aa24.07■■□□□ 1.44
GTF2A1-201ENST00000298173 GON4LQ3T8J9 2241 aa24.07■■□□□ 1.44
GTF2A1-201ENST00000298173 NCF1BA6NI72 391 aaPredicted RBP24.07■■□□□ 1.44
GTF2A1-201ENST00000298173 NCF1CA8MVU1 366 aaPredicted RBP24.07■■□□□ 1.44
GTF2A1-201ENST00000298173 SIX3O95343 332 aaPredicted RBP24.07■■□□□ 1.44
GTF2A1-201ENST00000298173 NCF1P14598 390 aaPredicted RBP24.07■■□□□ 1.44
GTF2A1-201ENST00000298173 VCLP18206 1134 aa24.07■■□□□ 1.44
GTF2A1-201ENST00000298173 BCKDHBP21953 392 aa24.07■■□□□ 1.44
GTF2A1-201ENST00000298173 SERPINB5P36952 375 aa24.07■■□□□ 1.44
GTF2A1-201ENST00000298173 THOP1P52888 689 aa24.07■■□□□ 1.44
GTF2A1-201ENST00000298173 RCN2Q14257 317 aa24.07■■□□□ 1.44
GTF2A1-201ENST00000298173 SETDB1Q15047 1291 aa24.07■■□□□ 1.44
GTF2A1-201ENST00000298173 MAML2Q8IZL2 1156 aaPredicted RBP24.07■■□□□ 1.44
GTF2A1-201ENST00000298173 GRAMD1AQ96CP6 724 aa24.07■■□□□ 1.44
GTF2A1-201ENST00000298173 GSTO2Q9H4Y5 243 aa24.07■■□□□ 1.44
GTF2A1-201ENST00000298173 BDP1A6H8Y1 2624 aa24.06■■□□□ 1.44
GTF2A1-201ENST00000298173 TGDSO95455 350 aa24.06■■□□□ 1.44
GTF2A1-201ENST00000298173 RAB44Q7Z6P3 723 aaPredicted RBP24.06■■□□□ 1.44
GTF2A1-201ENST00000298173 CCNYL1Q8N7R7 359 aa24.06■■□□□ 1.44
GTF2A1-201ENST00000298173 ZNF473Q8WTR7 871 aaKnown RBP24.06■■□□□ 1.44
GTF2A1-201ENST00000298173 SNX19Q92543 992 aa24.06■■□□□ 1.44
GTF2A1-201ENST00000298173 RHBDF1Q96CC6 855 aa24.06■■□□□ 1.44
GTF2A1-201ENST00000298173 PDXPQ96GD0 296 aa24.06■■□□□ 1.44
GTF2A1-201ENST00000298173 NSRP1Q9H0G5 558 aaKnown RBP24.06■■□□□ 1.44
GTF2A1-201ENST00000298173 KLC4Q9NSK0 619 aa24.06■■□□□ 1.44
GTF2A1-201ENST00000298173 EIF2B4Q9UI10 523 aaKnown RBP24.06■■□□□ 1.44
GTF2A1-201ENST00000298173 ACSL5Q9ULC5 683 aa24.06■■□□□ 1.44
GTF2A1-201ENST00000298173 DNAJC16Q9Y2G8 782 aa24.06■■□□□ 1.44
GTF2A1-201ENST00000298173 PLEKHM1Q9Y4G2 1056 aa24.06■■□□□ 1.44
GTF2A1-201ENST00000298173 ST14Q9Y5Y6 855 aa24.06■■□□□ 1.44
GTF2A1-201ENST00000298173 TAPBPO15533 448 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 SNX2O60749 519 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 ACP5P13686 325 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 CCR10P46092 362 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 GNPDA1P46926 289 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 GALNT1Q10472 559 aaPredicted RBP24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 ARL13AQ5H913 290 aaPredicted RBP24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 SULT1C3Q6IMI6 304 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 FBXO15Q8NCQ5 510 aaPredicted RBP24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 C1orf216Q8TAB5 229 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 MCOLN3Q8TDD5 553 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 SLC6A18Q96N87 628 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 TRIM54Q9BYV2 358 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 ZDHHC5Q9C0B5 715 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 DUSP15Q9H1R2 295 aaPredicted RBP24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 CARS2Q9HA77 564 aaKnown RBP24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 MOSPD1Q9UJG1 213 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 HAO1Q9UJM8 370 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 GPSM3Q9Y4H4 160 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 SPTY2D1-AS1A0A0U1RR47 76 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 LRRC14BA6NHZ5 514 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 ARHGEF33A8MVX0 844 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 GUCA1CO95843 209 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 CHRNGP07510 517 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 RPS17P08708 135 aaKnown RBP24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 CYP2A7P20853 494 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 AGTR2P50052 363 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 PCBP2Q15366 365 aaKnown RBP eCLIP24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 CFAP157Q5JU67 520 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 FRMD7Q6ZUT3 714 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 WDR5BQ86VZ2 330 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 TSACCQ96A04 125 aaPredicted RBP24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 FOPNLQ96NB1 174 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 OR2M4Q96R27 311 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 ELAC2Q9BQ52 826 aaKnown RBP24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 DGKBQ9Y6T7 804 aa24.05■■□□□ 1.44
GTF2A1-201ENST00000298173 A0A1W2PR77 199 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 NDUFAB1O14561 156 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 SNX3O60493 162 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 SUPT7LO94864 414 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 SNUPNO95149 360 aaKnown RBP24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 HIST1H2AGP0C0S8 130 aaPredicted RBP24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 THEGLP0DJG4 465 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 HIST1H2ADP20671 130 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 EEF1DP29692 281 aaKnown RBP24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 FNTBP49356 437 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 AP1S2P56377 157 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 SRP54P61011 504 aaKnown RBP24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 NAA20P61599 178 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 OVGP1Q12889 678 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 PTK2BQ14289 1009 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 ZXDCQ2QGD7 858 aaPredicted RBP24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 ALG11Q2TAA5 492 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 EEF1AKMT2Q5JPI9 291 aaKnown RBP24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 RPS27LQ71UM5 84 aaKnown RBP24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 PDZD3Q86UT5 571 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 CRLF3Q8IUI8 442 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 C1orf210Q8IVY1 113 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 TMEM105Q8N8V8 129 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 MFSD2AQ8NA29 543 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 SPDYE1Q8NFV5 336 aaPredicted RBP24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 CFAP61Q8NHU2 1237 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 DNASE2BQ8WZ79 361 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 KLHDC7BQ96G42 594 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 HIST1H2AHQ96KK5 128 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 HIST1H2AJQ99878 128 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 H2AFJQ9BTM1 129 aa24.04■■□□□ 1.44
GTF2A1-201ENST00000298173 TRMOQ9BU70 441 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms