RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 TRIM54Q9BYV2 358 aa8.97□□□□□ -0.97
PDPN-201ENST00000294489 CD244Q9BZW8 370 aa8.97□□□□□ -0.97
PDPN-201ENST00000294489 TTYH1Q9H313 450 aaPredicted RBP8.97□□□□□ -0.97
PDPN-201ENST00000294489 EPHX3Q9H6B9 360 aa8.97□□□□□ -0.97
PDPN-201ENST00000294489 IPPKQ9H8X2 491 aa8.97□□□□□ -0.97
PDPN-201ENST00000294489 SPAG4Q9NPE6 437 aa8.97□□□□□ -0.97
PDPN-201ENST00000294489 GIMAP2Q9UG22 337 aa8.97□□□□□ -0.97
PDPN-201ENST00000294489 PACSIN3Q9UKS6 424 aa8.97□□□□□ -0.97
PDPN-201ENST00000294489 NDUFAF1Q9Y375 327 aa8.97□□□□□ -0.97
PDPN-201ENST00000294489 PDE4DIPQ5VU43 2346 aa8.97□□□□□ -0.97
PDPN-201ENST00000294489 NR5A2O00482 541 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 TRIM38O00635 465 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 FBP2O00757 339 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 ANGPT2O15123 496 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 AP1G1O43747 822 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 CAPN1P07384 714 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 ANXA5P08758 320 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 PRR35P0CG20 571 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 HMOX2P30519 316 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 CCR7P32248 378 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 CEACAM7Q14002 265 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 AGERQ15109 404 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 PHKG1Q16816 387 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 ATP6AP1LQ52LC2 224 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 LDLRAP1Q5SW96 308 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 HACD2Q6Y1H2 254 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 DSG4Q86SJ6 1040 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 KBTBD6Q86V97 674 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 DCBLD1Q8N8Z6 715 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 ST13P5Q8NFI4 369 aaPredicted RBP8.96□□□□□ -0.97
PDPN-201ENST00000294489 SKA2Q8WVK7 121 aaPredicted RBP8.96□□□□□ -0.97
PDPN-201ENST00000294489 NRG4Q8WWG1 115 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 ROPN1LQ96C74 230 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 RHBDF1Q96CC6 855 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 CDK15Q96Q40 435 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 ACOX2Q99424 681 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 CROTQ9UKG9 612 aa8.96□□□□□ -0.97
PDPN-201ENST00000294489 CNOT6Q9ULM6 557 aaKnown RBP8.96□□□□□ -0.97
PDPN-201ENST00000294489 RANBP2P49792 3224 aaKnown RBP8.96□□□□□ -0.97
PDPN-201ENST00000294489 K7EPI3 171 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 QSOX1O00391 747 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 WNT9AO14904 365 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 NUAK1O60285 661 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 ENO2P09104 434 aaPredicted RBP8.96□□□□□ -0.98
PDPN-201ENST00000294489 HIST1H2AGP0C0S8 130 aaPredicted RBP8.96□□□□□ -0.98
PDPN-201ENST00000294489 MPC1LP0DKB6 136 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 MSH3P20585 1137 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 HIST1H2ADP20671 130 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 PIK3CGP48736 1102 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 NME5P56597 212 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 ERVK-8P63133 956 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 HSPA14Q0VDF9 509 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 ADGRE1Q14246 886 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 C18orf21Q32NC0 220 aaPredicted RBP8.96□□□□□ -0.98
PDPN-201ENST00000294489 C2orf27AQ580R0 203 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 PLEKHS1Q5SXH7 462 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 PIP5KL1Q5T9C9 394 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 LETMD1Q6P1Q0 360 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 SERPINA13PQ6UXR4 307 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 ERN2Q76MJ5 926 aaKnown RBP8.96□□□□□ -0.98
PDPN-201ENST00000294489 DET1Q7L5Y6 550 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 DHDDSQ86SQ9 333 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 FUNDC1Q8IVP5 155 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 SNX31Q8N9S9 440 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 OR4F6Q8NGB9 312 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 SCAMP4Q969E2 229 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 HIST1H2AHQ96KK5 128 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 ZNF570Q96NI8 536 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 HIST1H2AJQ99878 128 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 H2AFJQ9BTM1 129 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 RIOK2Q9BVS4 552 aaKnown RBP8.96□□□□□ -0.98
PDPN-201ENST00000294489 VCX3BQ9H321 246 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 CLDND1Q9NY35 253 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 MBD1Q9UIS9 605 aaPredicted RBP8.96□□□□□ -0.98
PDPN-201ENST00000294489 PCDHGA7Q9Y5G6 932 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 STON1Q9Y6Q2 735 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 A0A1W2PPC1 479 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 KPNA3O00505 521 aaPredicted RBP8.96□□□□□ -0.98
PDPN-201ENST00000294489 OR7A17O14581 309 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 TAPBPO15533 448 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 KATNA1O75449 491 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 C8GP07360 202 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 ELFN1P0C7U0 828 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 ACADSP16219 412 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 XRCC1P18887 633 aaPredicted RBP8.96□□□□□ -0.98
PDPN-201ENST00000294489 ATP6V1C1P21283 382 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 DPP6P42658 865 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 PSMD8P48556 350 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 RPIAP49247 311 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 GALK1P51570 392 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 CDKL1Q00532 357 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 MAP7D1Q3KQU3 841 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 CMPK2Q5EBM0 449 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 TTC23LQ6PF05 361 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 IL27RAQ6UWB1 636 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 SCIMPQ6UWF3 145 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 NUDT18Q6ZVK8 323 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 RNF148Q8N7C7 305 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 FNDC5Q8NAU1 212 aa8.96□□□□□ -0.98
PDPN-201ENST00000294489 TSPEARQ8WU66 669 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms