RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 KLQ9UEF7 1012 aa11.21□□□□□ -0.62
NPC1L1-201ENST00000289547 FETUBQ9UGM5 382 aa11.21□□□□□ -0.62
NPC1L1-201ENST00000289547 FBXW11Q9UKB1 542 aa11.21□□□□□ -0.62
NPC1L1-201ENST00000289547 CNOT6Q9ULM6 557 aaKnown RBP11.21□□□□□ -0.62
NPC1L1-201ENST00000289547 OAZ3Q9UMX2 235 aa11.21□□□□□ -0.62
NPC1L1-201ENST00000289547 EFR3BQ9Y2G0 817 aa11.21□□□□□ -0.62
NPC1L1-201ENST00000289547 GPSM3Q9Y4H4 160 aa11.21□□□□□ -0.62
NPC1L1-201ENST00000289547 OR6C70A6NIJ9 312 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 SLC22A1O15245 554 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 NFKB1P19838 968 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 TIE1P35590 1138 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 GNG2P59768 71 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 PTP4A2Q12974 167 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 SLC9B1Q4ZJI4 515 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 SYCE2Q6PIF2 218 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 VN1R5Q7Z5H4 357 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 C11orf96Q7Z7L8 435 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 TCEAL8Q8IYN2 117 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 MRPL43Q8N983 215 aaKnown RBP11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 CXorf40BQ96DE9 158 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 P2RY13Q9BPV8 354 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 ABCG4Q9H172 646 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 A0A1B0GUL6 1792 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 M0QZQ0 153 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 TK2O00142 265 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 FGF1P05230 155 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 AMD1P17707 334 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 TLR1Q15399 786 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 C2orf27AQ580R0 203 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 SLC22A17Q8WUG5 538 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 PIK3R3Q92569 461 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 MRPL38Q96DV4 380 aaKnown RBP11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 MIPEPQ99797 713 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 MED28Q9H204 178 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 RHOJQ9H4E5 214 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 CCSER2Q9H7U1 834 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 TMEM9Q9P0T7 183 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 SIX4Q9UIU6 781 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 FAM92AA1XBS5 289 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 GRXCR1A8MXD5 290 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 EFCAB9A8MZ26 197 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 UMPSP11172 480 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 SKP1P63208 163 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 NRG1Q02297 640 aaPredicted RBP11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 RELAQ04206 551 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 CBX2Q14781 532 aaPredicted RBP11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 TRMT10BQ6PF06 316 aaKnown RBP11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 ZNF852Q6ZMS4 543 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 CCDC28AQ8IWP9 274 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 CMTM8Q8IZV2 173 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 SLC34A3Q8N130 599 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 ALG2Q9H553 416 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 GDE1Q9NZC3 331 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 GMEB2Q9UKD1 530 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 PADI4Q9UM07 663 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 ZSCAN5BA6NJL1 495 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 PTGESO14684 152 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 ATF6P18850 670 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 FMO4P31512 558 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 GPD2P43304 727 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 SOX4Q06945 474 aaPredicted RBP11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 CDK18Q07002 472 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 RFTN1Q14699 578 aaPredicted RBP11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 VITQ6UXI7 678 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 PHC2Q8IXK0 858 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 ELMOD2Q8IZ81 293 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 HMGB4Q8WW32 186 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 C1GALT1C1Q96EU7 318 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 VPS51Q9UID3 782 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 AJAP1Q9UKB5 411 aaPredicted RBP11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 CDH7Q9ULB5 785 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 WNT6Q9Y6F9 365 aa11.2□□□□□ -0.62
NPC1L1-201ENST00000289547 DYRK3O43781 588 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 DNAJA2O60884 412 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 TMEM63AO94886 807 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 SNX4O95219 450 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 FYNP06241 537 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 GPR15P49685 360 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 CLCN5P51795 746 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 PTSQ03393 145 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 WDR45BQ5MNZ6 344 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 OR52E8Q6IFG1 317 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 PHTF2Q8N3S3 785 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 TRMOQ9BU70 441 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 SMOC2Q9H3U7 446 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 TMEM138Q9NPI0 162 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 TMPRSS4Q9NRS4 437 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 UCKL1Q9NWZ5 548 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 ADAMTS6Q9UKP5 1117 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 EDDM13A0A1B0GTR0 161 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 DHPSP49366 369 aaPredicted RBP11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 RPL38P63173 70 aaKnown RBP11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 CD83Q01151 205 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 MBLAC2Q68D91 279 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 UBE2Q1Q7Z7E8 422 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 HDDC3Q8N4P3 179 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 BEND7Q8N7W2 519 aaPredicted RBP11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 KCNS3Q9BQ31 491 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 ACAT2Q9BWD1 397 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 SPATA6Q9NWH7 488 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms