RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 TCRBV3S1A0A5B6 114 aa18.89■□□□□ 0.61
BRAF-201ENST00000288602 CYP17A1P05093 508 aa18.89■□□□□ 0.61
BRAF-201ENST00000288602 EPB42P16452 691 aa18.89■□□□□ 0.61
BRAF-201ENST00000288602 VIPR1P32241 457 aa18.89■□□□□ 0.61
BRAF-201ENST00000288602 DGKQP52824 942 aa18.89■□□□□ 0.61
BRAF-201ENST00000288602 PTGR1Q14914 329 aa18.89■□□□□ 0.61
BRAF-201ENST00000288602 FAM109BQ6ICB4 259 aaPredicted RBP18.89■□□□□ 0.61
BRAF-201ENST00000288602 CYP20A1Q6UW02 462 aa18.89■□□□□ 0.61
BRAF-201ENST00000288602 TMC5Q6UXY8 1006 aa18.89■□□□□ 0.61
BRAF-201ENST00000288602 KIAA0907Q7Z7F0 614 aaPredicted RBP18.89■□□□□ 0.61
BRAF-201ENST00000288602 AMIGO2Q86SJ2 522 aa18.89■□□□□ 0.61
BRAF-201ENST00000288602 KIAA2013Q8IYS2 634 aa18.89■□□□□ 0.61
BRAF-201ENST00000288602 PHC3Q8NDX5 983 aa18.89■□□□□ 0.61
BRAF-201ENST00000288602 DUS2Q9NX74 493 aaKnown RBP18.89■□□□□ 0.61
BRAF-201ENST00000288602 IL36AQ9UHA7 158 aa18.89■□□□□ 0.61
BRAF-201ENST00000288602 CCL27Q9Y4X3 112 aa18.89■□□□□ 0.61
BRAF-201ENST00000288602 PCDHA9Q9Y5H5 950 aa18.89■□□□□ 0.61
BRAF-201ENST00000288602 TMEM202A6NGA9 273 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 FADS2P1A8MWK0 482 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 EEDO75530 441 aaKnown RBP18.88■□□□□ 0.61
BRAF-201ENST00000288602 ANXA5P08758 320 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 LINGO3P0C6S8 592 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 DGKGP49619 791 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 DMC1Q14565 340 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 GRIN2CQ14957 1233 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 TLR1Q15399 786 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 CPSF6Q16630 551 aaKnown RBP eCLIP18.88■□□□□ 0.61
BRAF-201ENST00000288602 CAPRIN2Q6IMN6 1127 aaKnown RBP18.88■□□□□ 0.61
BRAF-201ENST00000288602 PSRC1Q6PGN9 363 aaPredicted RBP18.88■□□□□ 0.61
BRAF-201ENST00000288602 NR1H4Q96RI1 486 aaPredicted RBP18.88■□□□□ 0.61
BRAF-201ENST00000288602 CCT7Q99832 543 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 CIDEBQ9UHD4 219 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 ZNF490Q9ULM2 529 aaPredicted RBP18.88■□□□□ 0.61
BRAF-201ENST00000288602 PCDHGB4Q9UN71 923 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 PCDHGB5Q9Y5G0 923 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 TIPRLO75663 272 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 MTHFD1P11586 935 aaKnown RBP18.88■□□□□ 0.61
BRAF-201ENST00000288602 EPORP19235 508 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 EMX2Q04743 252 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 NRF1Q16656 503 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 TMEM125Q96AQ2 219 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 ULK4Q96C45 1275 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 RDH14Q9HBH5 336 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 ZIM2Q9NZV7 527 aa18.88■□□□□ 0.61
BRAF-201ENST00000288602 FAM234BA2RU67 622 aa18.87■□□□□ 0.61
BRAF-201ENST00000288602 UPK3BL1B0FP48 263 aa18.87■□□□□ 0.61
BRAF-201ENST00000288602 UPK3BL2E5RIL1 263 aa18.87■□□□□ 0.61
BRAF-201ENST00000288602 ULK1O75385 1050 aa18.87■□□□□ 0.61
BRAF-201ENST00000288602 CYP2A6P11509 494 aaPredicted RBP18.87■□□□□ 0.61
BRAF-201ENST00000288602 NCK1P16333 377 aa18.87■□□□□ 0.61
BRAF-201ENST00000288602 HERVK_113Q902F9 699 aa18.87■□□□□ 0.61
BRAF-201ENST00000288602 ELMO1Q92556 727 aa18.87■□□□□ 0.61
BRAF-201ENST00000288602 FOXJ1Q92949 421 aa18.87■□□□□ 0.61
BRAF-201ENST00000288602 PPWD1Q96BP3 646 aaKnown RBP18.87■□□□□ 0.61
BRAF-201ENST00000288602 P2RY13Q9BPV8 354 aa18.87■□□□□ 0.61
BRAF-201ENST00000288602 AURKCQ9UQB9 309 aa18.87■□□□□ 0.61
BRAF-201ENST00000288602 ALPK3Q96L96 1907 aa18.87■□□□□ 0.61
BRAF-201ENST00000288602 OTOL1A6NHN0 477 aaPredicted RBP18.86■□□□□ 0.61
BRAF-201ENST00000288602 CLGNO14967 610 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 MAP3K13O43283 966 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 HNRNPA1P09651 372 aaKnown RBP eCLIP18.86■□□□□ 0.61
BRAF-201ENST00000288602 CISD3P0C7P0 127 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 CBSLP0DN79 551 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 HSPA8P11142 646 aaKnown RBP18.86■□□□□ 0.61
BRAF-201ENST00000288602 ADH5P11766 374 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 XPAP23025 273 aaPredicted RBP18.86■□□□□ 0.61
BRAF-201ENST00000288602 HOXA9P31269 272 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 CBSP35520 551 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 GGT5P36269 586 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 GRIK2Q13002 908 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 PRKG2Q13237 762 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 ZFAND4Q86XD8 727 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 TICAM1Q8IUC6 712 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 SFTPA1Q8IWL2 248 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 OR2T34Q8NGX1 318 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 OR2T3Q8NH03 318 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 NXPE3Q969Y0 559 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 WRAP53Q9BUR4 548 aaKnown RBP18.86■□□□□ 0.61
BRAF-201ENST00000288602 HEBP1Q9NRV9 189 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 MARK1Q9P0L2 795 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 LEF1Q9UJU2 399 aaPredicted RBP18.86■□□□□ 0.61
BRAF-201ENST00000288602 CNOT6Q9ULM6 557 aaKnown RBP18.86■□□□□ 0.61
BRAF-201ENST00000288602 C16orf96A6NNT2 1141 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 SGTAO43765 313 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 HLA-EP13747 358 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 SLC6A11P48066 632 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 NEK2P51955 445 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 MTX3Q5HYI7 312 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 ZDHHC20Q5W0Z9 365 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 OR52E8Q6IFG1 317 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 NANOGP8Q6NSW7 305 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 HMBOX1Q6NT76 420 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 PRMT9Q6P2P2 845 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 RGL4Q8IZJ4 473 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 LILRA3Q8N6C8 439 aaPredicted RBP18.86■□□□□ 0.61
BRAF-201ENST00000288602 EME1Q96AY2 570 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 ATG10Q9H0Y0 220 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 VCXQ9H320 206 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 ALG2Q9H553 416 aa18.86■□□□□ 0.61
BRAF-201ENST00000288602 ACTR8Q9H981 624 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms