RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 TRIB2Q92519 343 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 ASIC4Q96FT7 647 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 ZNF347Q96SE7 839 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 PRDM8Q9NQV8 689 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 IMPAD1Q9NX62 359 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 NDST3O95803 873 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 UGT2B4P06133 528 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 RHOCP08134 193 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 TCF3P15923 654 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 TOP3AQ13472 1001 aaPredicted RBP13.18□□□□□ -0.3
SCAF4-201ENST00000286835 SEMA3AQ14563 771 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 UBXN11Q5T124 520 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 PIK3R6Q5UE93 754 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 KANK2Q63ZY3 851 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 OR10T2Q8NGX3 314 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 NDNFQ8TB73 568 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 SCHIP1Q9P0W5 487 aaPredicted RBP13.18□□□□□ -0.3
SCAF4-201ENST00000286835 VPS9D1Q9Y2B5 631 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 PCDHB5Q9Y5E4 795 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 PCDHA9Q9Y5H5 950 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 GSTT2P0CG29 244 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 GSTT2BP0CG30 244 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 LPOP22079 712 aaPredicted RBP13.17□□□□□ -0.3
SCAF4-201ENST00000286835 HOXD12P35452 270 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 CASP9P55211 416 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 RNF219Q5W0B1 726 aaPredicted RBP13.17□□□□□ -0.3
SCAF4-201ENST00000286835 MSANTD2Q6P1R3 559 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 KDELC1Q6UW63 502 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 LRRC49Q8IUZ0 686 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 ZDHHC21Q8IVQ6 265 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 KRTCAP2Q8N6L1 136 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 SCLYQ96I15 445 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 ACBD6Q9BR61 282 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 YTHDF1Q9BYJ9 559 aaKnown RBP13.17□□□□□ -0.3
SCAF4-201ENST00000286835 CEP44Q9C0F1 390 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 KRT84Q9NSB2 600 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 LY75O60449 1722 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 A0A0D9SEW6 157 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 COL6A1P12109 1028 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 ADRA1AP35348 466 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 RECQLP46063 649 aaPredicted RBP13.17□□□□□ -0.3
SCAF4-201ENST00000286835 PURAQ00577 322 aaKnown RBP13.17□□□□□ -0.3
SCAF4-201ENST00000286835 FOXM1Q08050 763 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 GTF2H2Q13888 395 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 PTPRRQ15256 657 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 PCBP1Q15365 356 aaKnown RBP eCLIP13.17□□□□□ -0.3
SCAF4-201ENST00000286835 PYCR3Q53H96 274 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 GTF2H2CQ6P1K8 395 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 TXNDC11Q6PKC3 985 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 STX19Q8N4C7 294 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 IGSF8Q969P0 613 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 PPP3R2Q96LZ3 170 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 NSUN3Q9H649 340 aaKnown RBP13.17□□□□□ -0.3
SCAF4-201ENST00000286835 MRM3Q9HC36 420 aaKnown RBP13.17□□□□□ -0.3
SCAF4-201ENST00000286835 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.17□□□□□ -0.3
SCAF4-201ENST00000286835 UNCXA6NJT0 531 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 ZNF701M0R085 212 aaPredicted RBP13.17□□□□□ -0.3
SCAF4-201ENST00000286835 MGEA5O60502 916 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 CD36P16671 472 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 FDXRP22570 491 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 TAF10Q12962 218 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 ZNF177Q13360 481 aaPredicted RBP13.17□□□□□ -0.3
SCAF4-201ENST00000286835 RFTN2Q52LD8 501 aaPredicted RBP13.17□□□□□ -0.3
SCAF4-201ENST00000286835 SPRED1Q7Z699 444 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 MON1AQ86VX9 555 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 TMEM132CQ8N3T6 1108 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 CLDN19Q8N6F1 224 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 OR13F1Q8NGS4 319 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 SH3YL1Q96HL8 342 aaPredicted RBP13.17□□□□□ -0.3
SCAF4-201ENST00000286835 MTIF3Q9H2K0 278 aaKnown RBP13.17□□□□□ -0.3
SCAF4-201ENST00000286835 VAPAQ9P0L0 249 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 GTF2IRD1Q9UHL9 959 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 UTS2RQ9UKP6 389 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 COL11A1P12107 1806 aaPredicted RBP13.17□□□□□ -0.3
SCAF4-201ENST00000286835 H0YAE9 185 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 RGS10O43665 173 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 SERPINB7O75635 380 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 CYP7B1O75881 506 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 OTCP00480 354 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 CRHBPP24387 322 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 HTR1BP28222 390 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 IDUAP35475 653 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 TTPAP49638 278 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 ADAM17P78536 824 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 LRRC74AQ0VAA2 488 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 TUSC3Q13454 348 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 RCAN2Q14206 197 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 GPR153Q6NV75 609 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 ALKAL1Q6UXT8 129 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 AKAP14Q86UN6 197 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 PIK3C3Q8NEB9 887 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 DPF3Q92784 378 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 ZIC5Q96T25 663 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 SARDHQ9UL12 918 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 ZNF232Q9UNY5 417 aa13.17□□□□□ -0.3
SCAF4-201ENST00000286835 HTR3EA5X5Y0 456 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 UPK3BL1B0FP48 263 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 UPK3BL2E5RIL1 263 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 SLC1A7O00341 560 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 ADAM23O75077 832 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms