RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 CEP97Q8IW35 865 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ADCY4Q8NFM4 1077 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 TMCO6Q96DC7 493 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 KLRG1Q96E93 195 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 C1GALT1C1Q96EU7 318 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 TUBGCP5Q96RT8 1024 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF347Q96SE7 839 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 PAIP1Q9H074 479 aaKnown RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 MED28Q9H204 178 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 GBA3Q9H227 469 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SEMA6AQ9H2E6 1030 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 TRPV5Q9NQA5 729 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 CCDC59Q9P031 241 aaKnown RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF282Q9UDV7 671 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 HES2Q9Y543 173 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 KIF1AQ12756 1690 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 RIMS1Q86UR5 1692 aaKnown RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 FAM240BA0A1B0GVZ2 78 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 TTC34A8MYJ7 566 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ORC5O43913 435 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 NRP2O60462 931 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 PLOD3O60568 738 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 TM7SF2O76062 418 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 AP2A1O95782 977 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 PET100P0DJ07 73 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ITGA3P26006 1051 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SLC6A4P31645 630 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 MLLT3P42568 568 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 CTSOP43234 321 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SLC5A3P53794 718 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 PCDH1Q08174 1060 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 DDR1Q08345 913 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 C2orf80Q0P641 193 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 MLC1Q15049 377 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 TYSND1Q2T9J0 566 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 NANOGNBQ7Z5D8 188 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 STYXQ8WUJ0 223 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 DIRAS2Q96HU8 199 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SLC35G5Q96KT7 338 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 C8orf48Q96LL4 319 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 OR2AG1Q9H205 316 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 BPIFA1Q9NP55 256 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF222Q9UK12 451 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 NPEPPSL1A6NEC2 478 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 KCNU1A8MYU2 1149 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 NPIPA5E9PKD4 350 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 AGPSO00116 658 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 INSIG1O15503 277 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 DDX3YO15523 660 aaKnown RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 IFNA21P01568 189 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 PRH1P02810 166 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 DBTP11182 482 aaKnown RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SOX9P48436 509 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 PITPNAQ00169 270 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 BDH1Q02338 343 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SLC9A4Q6AI14 798 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 LRRC70Q7Z2Q7 622 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ADGRA1Q86SQ6 560 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 KBTBD6Q86V97 674 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 GIPC3Q8TF64 312 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 C7orf26Q96N11 449 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 TRMT61BQ9BVS5 477 aaKnown RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 EPB41L1Q9H4G0 881 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ACTL8Q9H568 366 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 IL17RBQ9NRM6 502 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 RAB21Q9UL25 225 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 MAFFQ9ULX9 164 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 NPIPA1Q9UND3 350 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 RPL36Q9Y3U8 105 aaKnown RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 CPQQ9Y646 472 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ERCC6L2Q5T890 1561 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ASTN1O14525 1302 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ADGRB2O60241 1585 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 MAN2B1O00754 1011 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 MSI1O43347 362 aaKnown RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 FAM163BP0C2L3 166 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 FAM153BP0C7A2 387 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 NOMO3P69849 1222 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 VLDLRP98155 873 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 RAB39AQ14964 217 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 CNTD1Q8N815 330 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 CHST4Q8NCG5 386 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 MCFD2Q8NI22 146 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 TM9SF4Q92544 642 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 KXD1Q9BQD3 176 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 NPLQ9BXD5 320 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ASPNQ9BXN1 380 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 POLR2J3Q9H1A7 115 aaKnown RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 C11orf49Q9H6J7 331 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 RETREG1Q9H6L5 497 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ANKRA2Q9H9E1 313 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 C1orf109Q9NX04 203 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SEC14L4Q9UDX3 406 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 DKKL1Q9UK85 242 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF490Q9ULM2 529 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-201ENST00000283254 SLC45A1Q9Y2W3 748 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 IFT52Q9Y366 437 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 E9PCH4 1651 aa4.01□□□□□ -1.77
SCN3A-201ENST00000283254 IQCMA0A1B0GVH7 501 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms