RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 HENMT1Q5T8I9 393 aaKnown RBP20.54■□□□□ 0.88
YBX3-202ENST00000279550 GTF2H2CQ6P1K8 395 aa20.54■□□□□ 0.88
YBX3-202ENST00000279550 LIPIQ6XZB0 460 aa20.54■□□□□ 0.88
YBX3-202ENST00000279550 ZNF852Q6ZMS4 543 aa20.54■□□□□ 0.88
YBX3-202ENST00000279550 ERN2Q76MJ5 926 aaKnown RBP20.54■□□□□ 0.88
YBX3-202ENST00000279550 VRK3Q8IV63 474 aa20.54■□□□□ 0.88
YBX3-202ENST00000279550 FUNDC1Q8IVP5 155 aa20.54■□□□□ 0.88
YBX3-202ENST00000279550 CDYL2Q8N8U2 506 aa20.54■□□□□ 0.88
YBX3-202ENST00000279550 OR2T11Q8NH01 316 aa20.54■□□□□ 0.88
YBX3-202ENST00000279550 OR2T3Q8NH03 318 aa20.54■□□□□ 0.88
YBX3-202ENST00000279550 RPLP0P6Q8NHW5 317 aa20.54■□□□□ 0.88
YBX3-202ENST00000279550 SLC45A3Q96JT2 553 aa20.54■□□□□ 0.88
YBX3-202ENST00000279550 HDAC8Q9BY41 377 aa20.54■□□□□ 0.88
YBX3-202ENST00000279550 WDR41Q9HAD4 459 aa20.54■□□□□ 0.88
YBX3-202ENST00000279550 EFCAB1Q9HAE3 211 aa20.54■□□□□ 0.88
YBX3-202ENST00000279550 CCDC167Q9P0B6 97 aa20.54■□□□□ 0.88
YBX3-202ENST00000279550 NFKBIL1Q9UBC1 381 aaPredicted RBP20.54■□□□□ 0.88
YBX3-202ENST00000279550 CA14Q9ULX7 337 aa20.54■□□□□ 0.88
YBX3-202ENST00000279550 TNPO3Q9Y5L0 923 aaKnown RBP20.54■□□□□ 0.88
YBX3-202ENST00000279550 PRR35P0CG20 571 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 CBSLP0DN79 551 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 ATP1B2P14415 290 aaPredicted RBP20.53■□□□□ 0.88
YBX3-202ENST00000279550 LBPP18428 481 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 CBSP35520 551 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 P2RY2P41231 377 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 HTR6P50406 440 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 NME5P56597 212 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 CREB5Q02930 508 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 REP15Q6BDI9 236 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 CACUL1Q86Y37 369 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 PGAM4Q8N0Y7 254 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 TRAM1L1Q8N609 369 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 RHBDF1Q96CC6 855 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 EGFL8Q99944 293 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 MKRN2Q9H000 416 aaKnown RBP20.53■□□□□ 0.88
YBX3-202ENST00000279550 FBRSQ9HAH7 460 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 PRPF19Q9UMS4 504 aaKnown RBP20.53■□□□□ 0.88
YBX3-202ENST00000279550 POMPQ9Y244 141 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 C15orf41Q9Y2V0 281 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 AREL1O15033 823 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 MID1O15344 667 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 ADH1BP00325 375 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 HGFP14210 728 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 VCLP18206 1134 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 DRD3P35462 400 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 GDF5P43026 501 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 ELP6Q0PNE2 266 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 CDC16Q13042 620 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 TRAF3Q13114 568 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 ZNF776Q68DI1 518 aaPredicted RBP20.53■□□□□ 0.88
YBX3-202ENST00000279550 BNC2Q6ZN30 1099 aaPredicted RBP20.53■□□□□ 0.88
YBX3-202ENST00000279550 UBTD2Q8WUN7 234 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 NRG4Q8WWG1 115 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 DCUN1D1Q96GG9 259 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 CDRT15Q96T59 188 aa20.53■□□□□ 0.88
YBX3-202ENST00000279550 WRAP53Q9BUR4 548 aaKnown RBP20.53■□□□□ 0.88
YBX3-202ENST00000279550 C19orf67A6NJJ6 358 aa20.52■□□□□ 0.88
YBX3-202ENST00000279550 CFLARO15519 480 aa20.52■□□□□ 0.88
YBX3-202ENST00000279550 SNRPB2P08579 225 aaKnown RBP20.52■□□□□ 0.88
YBX3-202ENST00000279550 C5AR1P21730 350 aa20.52■□□□□ 0.88
YBX3-202ENST00000279550 THOP1P52888 689 aa20.52■□□□□ 0.88
YBX3-202ENST00000279550 SESN3P58005 492 aa20.52■□□□□ 0.88
YBX3-202ENST00000279550 PRKCQQ04759 706 aa20.52■□□□□ 0.88
YBX3-202ENST00000279550 CNTN1Q12860 1018 aa20.52■□□□□ 0.88
YBX3-202ENST00000279550 ART3Q13508 389 aa20.52■□□□□ 0.88
YBX3-202ENST00000279550 CEACAM7Q14002 265 aa20.52■□□□□ 0.88
YBX3-202ENST00000279550 MAPRE2Q15555 327 aa20.52■□□□□ 0.88
YBX3-202ENST00000279550 CRY1Q16526 586 aa20.52■□□□□ 0.88
YBX3-202ENST00000279550 EFL1Q7Z2Z2 1120 aaKnown RBP20.52■□□□□ 0.88
YBX3-202ENST00000279550 AADATQ8N5Z0 425 aa20.52■□□□□ 0.88
YBX3-202ENST00000279550 OR4F6Q8NGB9 312 aa20.52■□□□□ 0.88
YBX3-202ENST00000279550 RDH14Q9HBH5 336 aa20.52■□□□□ 0.88
YBX3-202ENST00000279550 WWOXQ9NZC7 414 aa20.52■□□□□ 0.88
YBX3-202ENST00000279550 TRIOO75962 3097 aa20.52■□□□□ 0.87
YBX3-202ENST00000279550 ATG2BQ96BY7 2078 aa20.51■□□□□ 0.87
YBX3-202ENST00000279550 H0Y858 1186 aa20.51■□□□□ 0.87
YBX3-202ENST00000279550 ELFN1P0C7U0 828 aa20.51■□□□□ 0.87
YBX3-202ENST00000279550 COL9A1P20849 921 aa20.51■□□□□ 0.87
YBX3-202ENST00000279550 PTDSS1P48651 473 aaKnown RBP20.51■□□□□ 0.87
YBX3-202ENST00000279550 STX1BP61266 288 aa20.51■□□□□ 0.87
YBX3-202ENST00000279550 RPS14P62263 151 aaKnown RBP20.51■□□□□ 0.87
YBX3-202ENST00000279550 HSPA14Q0VDF9 509 aa20.51■□□□□ 0.87
YBX3-202ENST00000279550 ACOX1Q15067 660 aa20.51■□□□□ 0.87
YBX3-202ENST00000279550 ZRSR2Q15696 482 aaKnown RBP20.51■□□□□ 0.87
YBX3-202ENST00000279550 KIF19Q2TAC6 998 aa20.51■□□□□ 0.87
YBX3-202ENST00000279550 SULT1C3Q6IMI6 304 aa20.51■□□□□ 0.87
YBX3-202ENST00000279550 BEND7Q8N7W2 519 aaPredicted RBP20.51■□□□□ 0.87
YBX3-202ENST00000279550 DDHD1Q8NEL9 900 aa20.51■□□□□ 0.87
YBX3-202ENST00000279550 RAB7BQ96AH8 199 aa20.51■□□□□ 0.87
YBX3-202ENST00000279550 CD244Q9BZW8 370 aa20.51■□□□□ 0.87
YBX3-202ENST00000279550 IPPKQ9H8X2 491 aa20.51■□□□□ 0.87
YBX3-202ENST00000279550 MRGBPQ9NV56 204 aa20.51■□□□□ 0.87
YBX3-202ENST00000279550 STX18Q9P2W9 335 aaKnown RBP20.51■□□□□ 0.87
YBX3-202ENST00000279550 WNT16Q9UBV4 365 aa20.51■□□□□ 0.87
YBX3-202ENST00000279550 PDE10AQ9Y233 779 aa20.51■□□□□ 0.87
YBX3-202ENST00000279550 COQ6Q9Y2Z9 468 aa20.51■□□□□ 0.87
YBX3-202ENST00000279550 C9JVG2 144 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 NUAK1O60285 661 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 VPS4BO75351 444 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 KATNA1O75449 491 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms