RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 RBM20Q5T481 1227 aaKnown RBP11.09□□□□□ -0.63
USP6NL-201ENST00000277575 UBR7Q8N806 425 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 ROPN1LQ96C74 230 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 TOR4AQ9NXH8 423 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 GALPQ9UBC7 116 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 A0A0D9SEW6 157 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 MEIS3P2A8K0S8 358 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 ZNF487B1APH4 448 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 COCHO43405 550 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 CTSKP43235 329 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 RGS8P57771 180 aaPredicted RBP11.09□□□□□ -0.63
USP6NL-201ENST00000277575 HSPB3Q12988 150 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 RIPK1Q13546 671 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 TRIM25Q14258 630 aaKnown RBP11.09□□□□□ -0.63
USP6NL-201ENST00000277575 PLEKHG6Q3KR16 790 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 ZNF57Q68EA5 555 aaPredicted RBP11.09□□□□□ -0.63
USP6NL-201ENST00000277575 ENPP7Q6UWV6 458 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 ZBED3Q96IU2 234 aaPredicted RBP11.09□□□□□ -0.63
USP6NL-201ENST00000277575 GPR22Q99680 433 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 EFCAB11Q9BUY7 163 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 KLHL25Q9H0H3 589 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 A0A1B0GW55 424 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 DNAJA2O60884 412 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 IFNW1P05000 195 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 DUX4L2P0CJ85 424 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 DUX4L3P0CJ86 424 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 DUX4L4P0CJ87 422 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 DUX4L5P0CJ88 424 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 DUX4L6P0CJ89 424 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 DUX4L7P0CJ90 424 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 DGKEP52429 567 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 HMGCS1Q01581 520 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 RING1Q06587 406 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 ATP1A4Q13733 1029 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 SIM2Q14190 667 aaPredicted RBP11.09□□□□□ -0.63
USP6NL-201ENST00000277575 LARS2Q15031 903 aaKnown RBP11.09□□□□□ -0.63
USP6NL-201ENST00000277575 RALGPS1Q5JS13 557 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 KBTBD2Q8IY47 623 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 FAM156AQ8NDB6 213 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 DNASE1L2Q92874 299 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 C1orf74Q96LT6 269 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 CRISPLD1Q9H336 500 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 EBF3Q9H4W6 596 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 ELAC1Q9H777 363 aaKnown RBP11.09□□□□□ -0.63
USP6NL-201ENST00000277575 EXO5Q9H790 373 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 CLK4Q9HAZ1 481 aaKnown RBP11.09□□□□□ -0.63
USP6NL-201ENST00000277575 ZSCAN32Q9NX65 697 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 PTGFRNQ9P2B2 879 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 DUX4Q9UBX2 424 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 RAPGEFL1Q9UHV5 662 aa11.09□□□□□ -0.63
USP6NL-201ENST00000277575 RP1L1Q8IWN7 2480 aaPredicted RBP11.09□□□□□ -0.63
USP6NL-201ENST00000277575 FAM149AA5PLN7 773 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 MAGEB17A8MXT2 336 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 FAM72CH0Y354 149 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 DLX3O60479 287 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 SCELO95171 688 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 RB1P06400 928 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 GPIP06744 558 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 VIPR1P32241 457 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 CDK9P50750 372 aaKnown RBP11.08□□□□□ -0.63
USP6NL-201ENST00000277575 ERVK-8P63133 956 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 PRR5P85299 388 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 FAM72AQ5TYM5 149 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 FAM72DQ6L9T8 149 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 PTCHD4Q6ZW05 846 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.08□□□□□ -0.63
USP6NL-201ENST00000277575 PIM3Q86V86 326 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 FAM72BQ86X60 149 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 TSTD1Q8NFU3 115 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 ZNF563Q8TA94 476 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 CDK15Q96Q40 435 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 REXO4Q9GZR2 422 aaKnown RBP11.08□□□□□ -0.63
USP6NL-201ENST00000277575 EPB41L1Q9H4G0 881 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 USP29Q9HBJ7 922 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 HMG20AQ9NP66 347 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 CCNB1IP1Q9NPC3 277 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 FBXL12Q9NXK8 326 aa11.08□□□□□ -0.63
USP6NL-201ENST00000277575 GPN3Q9UHW5 284 aaPredicted RBP11.08□□□□□ -0.63
USP6NL-201ENST00000277575 EDDM13A0A1B0GTR0 161 aa11.08□□□□□ -0.64
USP6NL-201ENST00000277575 POP7O75817 140 aaKnown RBP11.08□□□□□ -0.64
USP6NL-201ENST00000277575 MFN2O95140 757 aa11.08□□□□□ -0.64
USP6NL-201ENST00000277575 ZNF30P17039 623 aa11.08□□□□□ -0.64
USP6NL-201ENST00000277575 ST13P5Q8NFI4 369 aaPredicted RBP11.08□□□□□ -0.64
USP6NL-201ENST00000277575 METTL21AQ8WXB1 218 aa11.08□□□□□ -0.64
USP6NL-201ENST00000277575 OVCA2Q8WZ82 227 aa11.08□□□□□ -0.64
USP6NL-201ENST00000277575 TSGA13Q96PP4 275 aa11.08□□□□□ -0.64
USP6NL-201ENST00000277575 RAB11FIP5Q9BXF6 653 aa11.08□□□□□ -0.64
USP6NL-201ENST00000277575 CADM1Q9BY67 442 aaKnown RBP11.08□□□□□ -0.64
USP6NL-201ENST00000277575 PDLIM7Q9NR12 457 aa11.08□□□□□ -0.64
USP6NL-201ENST00000277575 PDP1Q9P0J1 537 aaPredicted RBP11.08□□□□□ -0.64
USP6NL-201ENST00000277575 DAPK2Q9UIK4 370 aa11.08□□□□□ -0.64
USP6NL-201ENST00000277575 NUP188Q5SRE5 1749 aa11.08□□□□□ -0.64
USP6NL-201ENST00000277575 PTGESO14684 152 aa11.08□□□□□ -0.64
USP6NL-201ENST00000277575 DLDP09622 509 aaKnown RBP11.08□□□□□ -0.64
USP6NL-201ENST00000277575 ZNF24P17028 368 aa11.08□□□□□ -0.64
USP6NL-201ENST00000277575 PRKCHP24723 683 aa11.08□□□□□ -0.64
USP6NL-201ENST00000277575 CLCNKAP51800 687 aa11.08□□□□□ -0.64
USP6NL-201ENST00000277575 GHRHRQ02643 423 aa11.08□□□□□ -0.64
USP6NL-201ENST00000277575 LGALS3BPQ08380 585 aa11.08□□□□□ -0.64
USP6NL-201ENST00000277575 DPYSQ14117 519 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms