RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 NUSAP1Q9BXS6 441 aaKnown RBP11.86□□□□□ -0.51
SDE2-201ENST00000272091 RASSF4Q9H2L5 321 aa11.86□□□□□ -0.51
SDE2-201ENST00000272091 IPPKQ9H8X2 491 aa11.86□□□□□ -0.51
SDE2-201ENST00000272091 WWOXQ9NZC7 414 aa11.86□□□□□ -0.51
SDE2-201ENST00000272091 ARHGEF33A8MVX0 844 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 ASGR2P07307 311 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 GSTM1P09488 218 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 SLC6A12P48065 614 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 PKNOX1P55347 436 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 GSTM4Q03013 218 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 SP140Q13342 867 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 AGERQ15109 404 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 PNCKQ6P2M8 343 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 SNX32Q86XE0 403 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 SLC22A15Q8IZD6 547 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 GLMNQ92990 594 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 CLPTM1LQ96KA5 538 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 TRIM39Q9HCM9 518 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 CD93Q9NPY3 652 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 SLC16A5O15375 505 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 SYNCRIPO60506 623 aaKnown RBP11.85□□□□□ -0.51
SDE2-201ENST00000272091 SLC44A4Q53GD3 710 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 CDKL4Q5MAI5 379 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 RALGPS2Q86X27 583 aaPredicted RBP11.85□□□□□ -0.51
SDE2-201ENST00000272091 DDIASQ8IXT1 998 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 SLC45A3Q96JT2 553 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 ARL15Q9NXU5 204 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 TMEM98Q9Y2Y6 226 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.85□□□□□ -0.51
SDE2-201ENST00000272091 QSOX1O00391 747 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 UBDO15205 165 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 ATP6V1G2O95670 118 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 PCCBP05166 539 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 GK5Q6ZS86 529 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 TP53I13Q8NBR0 393 aaPredicted RBP11.85□□□□□ -0.51
SDE2-201ENST00000272091 CMTM5Q96DZ9 223 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 HIC2Q96JB3 615 aa11.85□□□□□ -0.51
SDE2-201ENST00000272091 K7EPI3 171 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 PLRG1O43660 514 aaKnown RBP11.84□□□□□ -0.51
SDE2-201ENST00000272091 RNASEH2AO75792 299 aaKnown RBP11.84□□□□□ -0.51
SDE2-201ENST00000272091 CAPN1P07384 714 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 C7P10643 843 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 ADSLP30566 484 aaPredicted RBP11.84□□□□□ -0.51
SDE2-201ENST00000272091 ABRQ12979 859 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 FAM83HQ6ZRV2 1179 aaPredicted RBP11.84□□□□□ -0.51
SDE2-201ENST00000272091 PARP9Q8IXQ6 854 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 DENND2DQ9H6A0 471 aaPredicted RBP11.84□□□□□ -0.51
SDE2-201ENST00000272091 A0A088AWK7 358 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 PRAMEF4O60810 478 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 RNASEH1O60930 286 aaKnown RBP11.84□□□□□ -0.51
SDE2-201ENST00000272091 KATNA1O75449 491 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 TM7SF2O76062 418 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 ANXA5P08758 320 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 BDKRB1P46663 353 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 HERC3Q15034 1050 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 PRAMEF9Q5VWM5 478 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 NEK5Q6P3R8 708 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 Q6ZSR9 355 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 HEATR4Q86WZ0 1026 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 SKA2Q8WVK7 121 aaPredicted RBP11.84□□□□□ -0.51
SDE2-201ENST00000272091 LINC00615Q96LM1 132 aaPredicted RBP11.84□□□□□ -0.51
SDE2-201ENST00000272091 RTKNQ9BST9 563 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 OPTCQ9UBM4 332 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 PCDH8O95206 1070 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 HOXB2P14652 356 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 GPX3P22352 226 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 CDK3Q00526 305 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 CDC16Q13042 620 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 SMAD4Q13485 552 aaKnown RBP11.84□□□□□ -0.51
SDE2-201ENST00000272091 RIPK1Q13546 671 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 SQLEQ14534 574 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 IRF4Q15306 451 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 METTL2BQ6P1Q9 378 aaKnown RBP11.84□□□□□ -0.51
SDE2-201ENST00000272091 FUNDC1Q8IVP5 155 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 OR9I1Q8NGQ6 314 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 FBXL12Q9NXK8 326 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 COLQQ9Y215 455 aaPredicted RBP11.84□□□□□ -0.51
SDE2-201ENST00000272091 PRKAB1Q9Y478 270 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 CCL27Q9Y4X3 112 aa11.84□□□□□ -0.51
SDE2-201ENST00000272091 NUMA1Q14980 2115 aa11.83□□□□□ -0.52
SDE2-201ENST00000272091 CHUKO15111 745 aa11.83□□□□□ -0.52
SDE2-201ENST00000272091 STK16O75716 305 aa11.83□□□□□ -0.52
SDE2-201ENST00000272091 SORBS2O94875 1100 aaKnown RBP11.83□□□□□ -0.52
SDE2-201ENST00000272091 PLA2G4EQ3MJ16 856 aa11.83□□□□□ -0.52
SDE2-201ENST00000272091 TMEM259Q4ZIN3 620 aa11.83□□□□□ -0.52
SDE2-201ENST00000272091 RP9Q8TA86 221 aaKnown RBP11.83□□□□□ -0.52
SDE2-201ENST00000272091 WDR60Q8WVS4 1066 aa11.83□□□□□ -0.52
SDE2-201ENST00000272091 KLK6Q92876 244 aa11.83□□□□□ -0.52
SDE2-201ENST00000272091 NTMT1Q9BV86 223 aa11.83□□□□□ -0.52
SDE2-201ENST00000272091 UBE2ZQ9H832 354 aaPredicted RBP11.83□□□□□ -0.52
SDE2-201ENST00000272091 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.83□□□□□ -0.52
SDE2-201ENST00000272091 CIDEBQ9UHD4 219 aa11.83□□□□□ -0.52
SDE2-201ENST00000272091 RNF11Q9Y3C5 154 aa11.83□□□□□ -0.52
SDE2-201ENST00000272091 ATP4BP51164 291 aa11.83□□□□□ -0.52
SDE2-201ENST00000272091 ADPRHP54922 357 aa11.83□□□□□ -0.52
SDE2-201ENST00000272091 PFN3P60673 137 aa11.83□□□□□ -0.52
SDE2-201ENST00000272091 CUL3Q13618 768 aa11.83□□□□□ -0.52
SDE2-201ENST00000272091 ABRAXAS2Q15018 415 aa11.83□□□□□ -0.52
SDE2-201ENST00000272091 SYTL3Q4VX76 610 aa11.83□□□□□ -0.52
SDE2-201ENST00000272091 CRTC3Q6UUV7 619 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms