RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 RIOX2Q8IUF8 465 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 RGL4Q8IZJ4 473 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 ROPN1LQ96C74 230 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 SLC15A5A6NIM6 579 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 RSL1D1O76021 490 aaKnown RBP11.88□□□□□ -0.51
SMG6-201ENST00000263073 RAP2AP10114 183 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 COL6A2P12110 1019 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 ELK4P28324 431 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 RORCP51449 518 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 ILF2Q12905 390 aaKnown RBP11.88□□□□□ -0.51
SMG6-201ENST00000263073 ATXN7L2Q5T6C5 722 aaPredicted RBP11.88□□□□□ -0.51
SMG6-201ENST00000263073 SERPINA9Q86WD7 417 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 SETD6Q8TBK2 473 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 PIK3R3Q92569 461 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 GPR25O00155 361 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 CBFBQ13951 182 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 UGT8Q16880 541 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 RTL4Q6ZR62 310 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 ADGRG6Q86SQ4 1221 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 TAC4Q86UU9 113 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 PHC2Q8IXK0 858 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 LNX2Q8N448 690 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 OR13C4Q8NGS5 318 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 ZCCHC10Q8TBK6 192 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 FATE1Q969F0 183 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 TRIM43Q96BQ3 446 aaPredicted RBP11.88□□□□□ -0.51
SMG6-201ENST00000263073 TTLL2Q9BWV7 592 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 RRAGCQ9HB90 399 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 ZNF69Q9UC07 566 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 CNTN6Q9UQ52 1028 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 PRELID1Q9Y255 219 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 BOLA2-SMG1P6H3BVE0 249 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 AURKAO14965 403 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 ORC5O43913 435 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 TULP3O75386 442 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 INMTO95050 263 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 AVPR1BP47901 424 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 CYP27C1Q4G0S4 372 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 TSTD2Q5T7W7 516 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 ABHD15Q6UXT9 468 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 C17orf64Q86WR6 236 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 PDSS2Q86YH6 399 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 SLC13A3Q8WWT9 602 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 RPL10LQ96L21 214 aaKnown RBP11.88□□□□□ -0.51
SMG6-201ENST00000263073 ZNF317Q96PQ6 595 aaPredicted RBP11.88□□□□□ -0.51
SMG6-201ENST00000263073 ZSCAN5AQ9BUG6 496 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 AKTIPQ9H8T0 292 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 HPF1Q9NWY4 346 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 DTLQ9NZJ0 730 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 FKBP7Q9Y680 259 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 SMIM28A0A1B0GU29 152 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 A0A1W2PPW3 197 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 ZNF806P0C7X5 589 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 CAMK1Q14012 370 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 TSTQ16762 297 aaKnown RBP11.88□□□□□ -0.51
SMG6-201ENST00000263073 FAAH2Q6GMR7 532 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 SVOPLQ8N434 492 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 STON2Q8WXE9 905 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 CFAP97Q9P2B7 532 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 FZD10Q9ULW2 581 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 C22orf31O95567 290 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 SLC2A2P11168 524 aaPredicted RBP11.88□□□□□ -0.51
SMG6-201ENST00000263073 CD247P20963 164 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 PPIBP23284 216 aaKnown RBP11.88□□□□□ -0.51
SMG6-201ENST00000263073 ENTPD1P49961 510 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 ZNF155Q12901 538 aaPredicted RBP11.88□□□□□ -0.51
SMG6-201ENST00000263073 CCDC36Q8IYA8 594 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 C3orf14Q9HBI5 128 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 FAM105AQ9NUU6 356 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 GULP1Q9UBP9 304 aa11.88□□□□□ -0.51
SMG6-201ENST00000263073 KDM4FA0A1W2PPD8 638 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 TRIM64CA6NLI5 447 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 I3L521 148 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 XPNPEP2O43895 674 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 GLUD1P00367 558 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 CPN2P22792 545 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 GABRR2P28476 465 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 OR1D2P34982 312 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 GPX6P59796 221 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 FOXRED2Q8IWF2 684 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 C11orf65Q8NCR3 313 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 ZNF248Q8NDW4 579 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 DQX1Q8TE96 717 aaKnown RBP11.87□□□□□ -0.51
SMG6-201ENST00000263073 UFD1Q92890 307 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 KCNA7Q96RP8 456 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 TTTY10Q9BZA0 68 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 DCSTAMPQ9H295 470 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 XPNPEP1Q9NQW7 623 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 KCTD5Q9NXV2 234 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 WWP2O00308 870 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 ASLP04424 464 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 SLC39A8Q9C0K1 460 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 EXO5Q9H790 373 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 POLR3BQ9NW08 1133 aaPredicted RBP11.87□□□□□ -0.51
SMG6-201ENST00000263073 COL20A1Q9P218 1284 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 WRAP73Q9P2S5 460 aaPredicted RBP11.87□□□□□ -0.51
SMG6-201ENST00000263073 SLC2A6Q9UGQ3 507 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 C2CD4BA6NLJ0 364 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 ACOX3O15254 700 aa11.87□□□□□ -0.51
SMG6-201ENST00000263073 MAGEB3O15480 346 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms