RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 CDH12P55289 794 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 FAPQ12884 760 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 MEA1Q16626 185 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 LIN52Q52LA3 116 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 TMEM110Q86TL2 294 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 TMC8Q8IU68 726 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 ART4Q93070 314 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 SNRNP25Q9BV90 132 aaKnown RBP12.68□□□□□ -0.38
TTC39A-202ENST00000262676 LGR4Q9BXB1 951 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 KCNE2Q9Y6J6 123 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 C9JVG2 144 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 FOSL1P15407 271 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 ARCN1P48444 511 aaKnown RBP12.68□□□□□ -0.38
TTC39A-202ENST00000262676 CXCR3P49682 368 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 ZMIZ2Q8NF64 920 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 BRSK1Q8TDC3 778 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 HERVK_113Q902F9 699 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 E2F3O00716 465 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 SLC25A14O95258 325 aaPredicted RBP12.68□□□□□ -0.38
TTC39A-202ENST00000262676 PCCBP05166 539 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 LAMP2P13473 410 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 FMO3P31513 532 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 UQCRC1P31930 480 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 FAM35AQ86V20 835 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 RAVER1Q8IY67 606 aaKnown RBP12.68□□□□□ -0.38
TTC39A-202ENST00000262676 CBR4Q8N4T8 237 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 ARL14EPQ8N8R7 260 aaPredicted RBP12.68□□□□□ -0.38
TTC39A-202ENST00000262676 ZBTB8BQ8NAP8 495 aaPredicted RBP12.68□□□□□ -0.38
TTC39A-202ENST00000262676 HIST1H2AAQ96QV6 131 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 SLC39A3Q9BRY0 314 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 SIRPGQ9P1W8 387 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 TRPS1Q9UHF7 1281 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 HPSEQ9Y251 543 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 PPLO60437 1756 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 A0A1W2PQH9 124 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 SLC31A1O15431 190 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 PSMD10O75832 226 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 NFATC1O95644 943 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 FCER2P06734 321 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 GOT1P17174 413 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 CD247P20963 164 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 MECP2P51608 486 aaKnown RBP12.68□□□□□ -0.38
TTC39A-202ENST00000262676 COMTD1Q86VU5 262 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 TMCO6Q96DC7 493 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 CXorf21Q9HAI6 301 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 ZNF446Q9NWS9 450 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 TLL2Q9Y6L7 1015 aa12.68□□□□□ -0.38
TTC39A-202ENST00000262676 ELOVL7A1L3X0 281 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 IQCF5A8MTL0 148 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 PIGXQ8TBF5 258 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 NXPE2Q96DL1 559 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 RC3H2Q9HBD1 1191 aaKnown RBP12.67□□□□□ -0.38
TTC39A-202ENST00000262676 EFCAB9A8MZ26 197 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 FAM155BO75949 473 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 ALAS2P22557 587 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 RGS8P57771 180 aaPredicted RBP12.67□□□□□ -0.38
TTC39A-202ENST00000262676 ZYG11BQ9C0D3 744 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 LRTM1Q9HBL6 345 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 ACP6Q9NPH0 428 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 FBXO9Q9UK97 447 aaPredicted RBP12.67□□□□□ -0.38
TTC39A-202ENST00000262676 TIMM22Q9Y584 194 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 A0A1W2PQ45 241 aaPredicted RBP12.67□□□□□ -0.38
TTC39A-202ENST00000262676 A0A1W2PQY0 241 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 PDCD5O14737 125 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 C22orf31O95567 290 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 RBM34P42696 430 aaKnown RBP12.67□□□□□ -0.38
TTC39A-202ENST00000262676 KLF10Q13118 480 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 SF1Q15637 639 aaKnown RBP12.67□□□□□ -0.38
TTC39A-202ENST00000262676 SPIN3Q5JUX0 258 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 ADGRG6Q86SQ4 1221 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 PIGZQ86VD9 579 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 TSTD1Q8NFU3 115 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 OR5J2Q8NH18 312 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 C1orf216Q8TAB5 229 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 FAM110BQ8TC76 370 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 PAK6Q9NQU5 681 aaPredicted RBP12.67□□□□□ -0.38
TTC39A-202ENST00000262676 GMIPQ9P107 970 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 IFT80Q9P2H3 777 aaPredicted RBP12.67□□□□□ -0.38
TTC39A-202ENST00000262676 KCNIP3Q9Y2W7 256 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 C13orf42A0A1B0GVH6 325 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 DHX15O43143 795 aaKnown RBP12.67□□□□□ -0.38
TTC39A-202ENST00000262676 TNFRSF8P28908 595 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 RYKP34925 604 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 EIF5AP63241 154 aaKnown RBP12.67□□□□□ -0.38
TTC39A-202ENST00000262676 SLC20A2Q08357 652 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 GRK1Q15835 563 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 CHST9Q7L1S5 443 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 ACMSDQ8TDX5 336 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 NDRG1Q92597 394 aaKnown RBP12.67□□□□□ -0.38
TTC39A-202ENST00000262676 ZSWIM3Q96MP5 696 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 EDARQ9UNE0 448 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 SIGLEC16A6NMB1 481 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 INMTO95050 263 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 STBD1O95210 358 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 PRAMEF1O95521 474 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 GCNT1Q02742 428 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 OR2AJ1Q8NGZ0 328 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 RFKQ969G6 155 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 EBNA1BP2Q99848 306 aaKnown RBP12.67□□□□□ -0.38
TTC39A-202ENST00000262676 SLC22A4Q9H015 551 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms