RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ACMSDQ8TDX5 336 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 DYDC1Q8WWB3 177 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 ISL2Q96A47 359 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 SLC45A3Q96JT2 553 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 ZNF317Q96PQ6 595 aaPredicted RBP13.09□□□□□ -0.31
SGCA-201ENST00000262018 AGAP2Q99490 1192 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 OSBPL1AQ9BXW6 950 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 ZDHHC6Q9H6R6 413 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 PRDM8Q9NQV8 689 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 TXNDC16Q9P2K2 825 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 APPL1Q9UKG1 709 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 CHKBQ9Y259 395 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 WASF2Q9Y6W5 498 aa13.09□□□□□ -0.31
SGCA-201ENST00000262018 CCDC78A2IDD5 438 aa13.08□□□□□ -0.32
SGCA-201ENST00000262018 CAPN5O15484 640 aaPredicted RBP13.08□□□□□ -0.32
SGCA-201ENST00000262018 TSPAN6O43657 245 aa13.08□□□□□ -0.32
SGCA-201ENST00000262018 LDB2O43679 373 aa13.08□□□□□ -0.32
SGCA-201ENST00000262018 RAD1O60671 282 aa13.08□□□□□ -0.32
SGCA-201ENST00000262018 VAPBO95292 243 aa13.08□□□□□ -0.32
SGCA-201ENST00000262018 MAGEA12P43365 314 aa13.08□□□□□ -0.32
SGCA-201ENST00000262018 AP1S1P61966 158 aa13.08□□□□□ -0.32
SGCA-201ENST00000262018 YPEL5P62699 121 aa13.08□□□□□ -0.32
SGCA-201ENST00000262018 GALNT3Q14435 633 aa13.08□□□□□ -0.32
SGCA-201ENST00000262018 PARS2Q7L3T8 475 aaKnown RBP13.08□□□□□ -0.32
SGCA-201ENST00000262018 RD3Q7Z3Z2 195 aa13.08□□□□□ -0.32
SGCA-201ENST00000262018 YTHDF3Q7Z739 585 aaKnown RBP13.08□□□□□ -0.32
SGCA-201ENST00000262018 TCP10LQ8TDR4 215 aa13.08□□□□□ -0.32
SGCA-201ENST00000262018 ASB12Q8WXK4 309 aa13.08□□□□□ -0.32
SGCA-201ENST00000262018 TSACCQ96A04 125 aaPredicted RBP13.08□□□□□ -0.32
SGCA-201ENST00000262018 CHMP6Q96FZ7 201 aa13.08□□□□□ -0.32
SGCA-201ENST00000262018 MAGEB18Q96M61 343 aa13.08□□□□□ -0.32
SGCA-201ENST00000262018 TUBGCP5Q96RT8 1024 aa13.08□□□□□ -0.32
SGCA-201ENST00000262018 CCT8L2Q96SF2 557 aa13.08□□□□□ -0.32
SGCA-201ENST00000262018 FAM167BQ9BTA0 163 aa13.08□□□□□ -0.32
SGCA-201ENST00000262018 MLXIPLQ9NP71 852 aa13.08□□□□□ -0.32
SGCA-201ENST00000262018 ITM2BQ9Y287 266 aa13.08□□□□□ -0.32
SGCA-201ENST00000262018 TTLL8A6PVC2 850 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 K7EM74 188 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 NDUFAB1O14561 156 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 COPEO14579 308 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 FZD6O60353 706 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 DDAH2O95865 285 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 ALDOAP04075 364 aaKnown RBP13.07□□□□□ -0.32
SGCA-201ENST00000262018 FGF3P11487 239 aaPredicted RBP13.07□□□□□ -0.32
SGCA-201ENST00000262018 GLB1P16278 677 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 PSMA3P25788 255 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 HADHAP40939 763 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 HK3P52790 923 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 TRAF2Q12933 501 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 THOC5Q13769 683 aaKnown RBP13.07□□□□□ -0.32
SGCA-201ENST00000262018 ARHGEF7Q14155 803 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 UGP2Q16851 508 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 GDPD4Q6W3E5 623 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 RCBTB1Q8NDN9 531 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 GPR156Q8NFN8 814 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 OR13J1Q8NGT2 312 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 GABPB2Q8TAK5 448 aaPredicted RBP13.07□□□□□ -0.32
SGCA-201ENST00000262018 GDAP1Q8TB36 358 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 STYXQ8WUJ0 223 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 NSRP1Q9H0G5 558 aaKnown RBP13.07□□□□□ -0.32
SGCA-201ENST00000262018 ATP13A3Q9H7F0 1226 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 GPN2Q9H9Y4 310 aaPredicted RBP13.07□□□□□ -0.32
SGCA-201ENST00000262018 RDH14Q9HBH5 336 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.07□□□□□ -0.32
SGCA-201ENST00000262018 PCDHGC4Q9Y5F7 938 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 PCDHGA3Q9Y5H0 932 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 B3GALT1Q9Y5Z6 326 aa13.07□□□□□ -0.32
SGCA-201ENST00000262018 CRYBG3Q68DQ2 2970 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.06□□□□□ -0.32
SGCA-201ENST00000262018 ERICH4A6NGS2 130 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 GOLGA8TH3BQL2 631 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 RASGRP1O95267 797 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 CRTAMO95727 393 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 CLDN1O95832 211 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 DHRS4L1P0CG22 281 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 DRD4P21917 467 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 SERPINA4P29622 427 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 GKP32189 559 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 CRHR1P34998 444 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 ABL2P42684 1182 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 ETV4P43268 484 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 POLD2P49005 469 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 SERPINB8P50452 374 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 PDE1BQ01064 536 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 ALG11Q2TAA5 492 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 AMZ1Q400G9 498 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 ZNF805Q5CZA5 627 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 HHATQ5VTY9 493 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 NEPROQ6NW34 567 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 C16orf46Q6P387 395 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 RGS9BPQ6ZS82 235 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 KIAA0408Q6ZU52 694 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 GALNT7Q86SF2 657 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 PIM3Q86V86 326 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 TAX1BP1Q86VP1 789 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 LMNTD2Q8IXW0 634 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 C2CD4AQ8NCU7 369 aaPredicted RBP13.06□□□□□ -0.32
SGCA-201ENST00000262018 CALML6Q8TD86 181 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 BLOC1S5Q8TDH9 187 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 ZNF473Q8WTR7 871 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms