RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 ZNF789Q5FWF6 425 aa11.34□□□□□ -0.59
PFDN1-201ENST00000261813 ZNF470Q6ECI4 717 aa11.34□□□□□ -0.59
PFDN1-201ENST00000261813 TIFABQ6ZNK6 161 aa11.34□□□□□ -0.59
PFDN1-201ENST00000261813 CCDC91Q7Z6B0 441 aa11.34□□□□□ -0.59
PFDN1-201ENST00000261813 AMZ2Q86W34 360 aa11.34□□□□□ -0.59
PFDN1-201ENST00000261813 C17orf82Q86X59 251 aaPredicted RBP11.34□□□□□ -0.59
PFDN1-201ENST00000261813 DENND6AQ8IWF6 608 aa11.34□□□□□ -0.59
PFDN1-201ENST00000261813 NAGSQ8N159 534 aa11.34□□□□□ -0.59
PFDN1-201ENST00000261813 ARL10Q8N8L6 244 aa11.34□□□□□ -0.59
PFDN1-201ENST00000261813 GPR156Q8NFN8 814 aa11.34□□□□□ -0.59
PFDN1-201ENST00000261813 OR2L2Q8NH16 312 aa11.34□□□□□ -0.59
PFDN1-201ENST00000261813 ZDHHC1Q8WTX9 485 aa11.34□□□□□ -0.59
PFDN1-201ENST00000261813 ALKBH8Q96BT7 664 aaKnown RBP11.34□□□□□ -0.59
PFDN1-201ENST00000261813 RBBP8Q99708 897 aa11.34□□□□□ -0.59
PFDN1-201ENST00000261813 P2RY12Q9H244 342 aa11.34□□□□□ -0.59
PFDN1-201ENST00000261813 OSGEPL1Q9H4B0 414 aa11.34□□□□□ -0.59
PFDN1-201ENST00000261813 RHOJQ9H4E5 214 aa11.34□□□□□ -0.59
PFDN1-201ENST00000261813 PRDM8Q9NQV8 689 aa11.34□□□□□ -0.59
PFDN1-201ENST00000261813 GMPR2Q9P2T1 348 aaKnown RBP11.34□□□□□ -0.59
PFDN1-201ENST00000261813 COMMD10Q9Y6G5 202 aa11.34□□□□□ -0.59
PFDN1-201ENST00000261813 CFAP47Q6ZTR5 3102 aa11.34□□□□□ -0.59
PFDN1-201ENST00000261813 CABIN1Q9Y6J0 2220 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 MGAT4DA6NG13 374 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 TNFSF14O43557 240 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 SNX2O60749 519 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 FAM155BO75949 473 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 SYF2O95926 243 aaKnown RBP11.33□□□□□ -0.6
PFDN1-201ENST00000261813 MT-ND3P03897 115 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 PROS1P07225 676 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 SLC1A2P43004 574 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 ACADVLP49748 655 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 LIMK2P53671 638 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 ADARP55265 1226 aaKnown RBP11.33□□□□□ -0.6
PFDN1-201ENST00000261813 MAZP56270 477 aaKnown RBP11.33□□□□□ -0.6
PFDN1-201ENST00000261813 DAB2P98082 770 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 NFE2L1Q14494 772 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 TMED2Q15363 201 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 NR0B2Q15466 257 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 SEPT7Q16181 437 aaKnown RBP11.33□□□□□ -0.6
PFDN1-201ENST00000261813 TNFAIP8L3Q5GJ75 292 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 UBAP2Q5T6F2 1119 aaKnown RBP11.33□□□□□ -0.6
PFDN1-201ENST00000261813 LILRA3Q8N6C8 439 aaPredicted RBP11.33□□□□□ -0.6
PFDN1-201ENST00000261813 ARFGAP2Q8N6H7 521 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 LKAAEAR1Q8TD35 194 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 ACMSDQ8TDX5 336 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 LPGAT1Q92604 370 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 MRRFQ96E11 262 aaKnown RBP11.33□□□□□ -0.6
PFDN1-201ENST00000261813 TSPAN17Q96FV3 270 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 CABS1Q96KC9 395 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 CCDC68Q9H2F9 335 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 FBXO6Q9NRD1 293 aaPredicted RBP11.33□□□□□ -0.6
PFDN1-201ENST00000261813 SMYD2Q9NRG4 433 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 EURLQ9NYK6 297 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 SCHIP1Q9P0W5 487 aaPredicted RBP11.33□□□□□ -0.6
PFDN1-201ENST00000261813 SLC17A6Q9P2U8 582 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 FAM8A1Q9UBU6 413 aa11.33□□□□□ -0.6
PFDN1-201ENST00000261813 ARID1BQ8NFD5 2236 aaPredicted RBP11.32□□□□□ -0.6
PFDN1-201ENST00000261813 UBA6A0AVT1 1052 aaPredicted RBP11.32□□□□□ -0.6
PFDN1-201ENST00000261813 EME2A4GXA9 379 aaPredicted RBP11.32□□□□□ -0.6
PFDN1-201ENST00000261813 IQCF5A8MTL0 148 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 H3BMM5 538 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 QSOX1O00391 747 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 PRMT5O14744 637 aaPredicted RBP11.32□□□□□ -0.6
PFDN1-201ENST00000261813 KCNJ13O60928 360 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 AHSGP02765 367 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 ITGA2BP08514 1039 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 FBXO45P0C2W1 286 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 OR56A5P0C7T3 313 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 F3P13726 295 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 BRAFP15056 766 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 VCLP18206 1134 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 RPS3P23396 243 aaKnown RBP eCLIP11.32□□□□□ -0.6
PFDN1-201ENST00000261813 ACP1P24666 158 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 RPL10P27635 214 aaKnown RBP11.32□□□□□ -0.6
PFDN1-201ENST00000261813 GCAP28676 217 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 SLC12A2P55011 1212 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 SIM1P81133 766 aaPredicted RBP11.32□□□□□ -0.6
PFDN1-201ENST00000261813 MPP1Q00013 466 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 CTBP1Q13363 440 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 EFTUD2Q15029 972 aaKnown RBP eCLIP11.32□□□□□ -0.6
PFDN1-201ENST00000261813 C14orf28Q4W4Y0 310 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 CTSL3PQ5NE16 218 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 GUSBP11Q6P575 273 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 TRIM46Q7Z4K8 759 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 SLCO6A1Q86UG4 719 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 LCA5Q86VQ0 697 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 ARL14Q8N4G2 192 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 GLMNQ92990 594 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 VPS39Q96JC1 886 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 BIRC8Q96P09 236 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 SMC6Q96SB8 1091 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 CCM2Q9BSQ5 444 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 COG4Q9H9E3 785 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 SSU72Q9NP77 194 aaKnown RBP11.32□□□□□ -0.6
PFDN1-201ENST00000261813 TBK1Q9UHD2 729 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 PADI4Q9UM07 663 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 NOVA2Q9UNW9 492 aaKnown RBP11.32□□□□□ -0.6
PFDN1-201ENST00000261813 WDR37Q9Y2I8 494 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 PCDHB1Q9Y5F3 818 aa11.32□□□□□ -0.6
PFDN1-201ENST00000261813 CACNA1GO43497 2377 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms