RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 NAA20P61599 178 aa16.06■□□□□ 0.16
TM9SF1-201ENST00000261789 MAPKAPK3Q16644 382 aa16.06■□□□□ 0.16
TM9SF1-201ENST00000261789 TCTN1Q2MV58 587 aa16.06■□□□□ 0.16
TM9SF1-201ENST00000261789 SULT1C3Q6IMI6 304 aa16.06■□□□□ 0.16
TM9SF1-201ENST00000261789 FAM117BQ6P1L5 589 aa16.06■□□□□ 0.16
TM9SF1-201ENST00000261789 R3HCC1LQ7Z5L2 792 aaKnown RBP16.06■□□□□ 0.16
TM9SF1-201ENST00000261789 RNF180Q86T96 592 aa16.06■□□□□ 0.16
TM9SF1-201ENST00000261789 ZDHHC13Q8IUH4 622 aa16.06■□□□□ 0.16
TM9SF1-201ENST00000261789 MIPOL1Q8TD10 442 aa16.06■□□□□ 0.16
TM9SF1-201ENST00000261789 DOK1Q99704 481 aa16.06■□□□□ 0.16
TM9SF1-201ENST00000261789 CDH7Q9ULB5 785 aa16.06■□□□□ 0.16
TM9SF1-201ENST00000261789 ANGPTL3Q9Y5C1 460 aa16.06■□□□□ 0.16
TM9SF1-201ENST00000261789 PCDHGA8Q9Y5G5 932 aa16.06■□□□□ 0.16
TM9SF1-201ENST00000261789 TNPO3Q9Y5L0 923 aaKnown RBP16.06■□□□□ 0.16
TM9SF1-201ENST00000261789 U3KQV3 271 aa16.06■□□□□ 0.16
TM9SF1-201ENST00000261789 H0YAE9 185 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 ZNF701M0R085 212 aaPredicted RBP16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 TULP3O75386 442 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 HMGA1P17096 107 aaKnown RBP16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 NR4A1P22736 598 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 CST5P28325 142 aaPredicted RBP16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 SUSD1Q6UWL2 747 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 GCNT7Q6ZNI0 430 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 ZNF548Q8NEK5 533 aaPredicted RBP16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 TBC1D15Q8TC07 691 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 SLC22A17Q8WUG5 538 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 DNAAF2Q9NVR5 837 aaKnown RBP16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 ARVCFO00192 962 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 SMAD6O43541 496 aaKnown RBP16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 SEC22BO75396 215 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 GMNNO75496 209 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 PRKD3O94806 890 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 PRSS23O95084 383 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 CLDN7O95471 211 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 CYP4F3Q08477 520 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 PLD1Q13393 1074 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 GPNMBQ14956 572 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 MEP1AQ16819 746 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 XAF1Q6GPH4 301 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 ANKS3Q6ZW76 656 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 PDLIM5Q96HC4 596 aaKnown RBP16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 FEM1AQ9BSK4 669 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 AMBRA1Q9C0C7 1298 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 LHPPQ9H008 270 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 WWOXQ9NZC7 414 aa16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 ZNF490Q9ULM2 529 aaPredicted RBP16.05■□□□□ 0.16
TM9SF1-201ENST00000261789 C1orf232A0A0U1RR37 186 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 TBKBP1A7MCY6 615 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 LOC730098B7Z3J9 87 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 AREL1O15033 823 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 FZD6O60353 706 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 GSNP06396 782 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 ZNF773Q6PK81 442 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 SPESP1Q6UW49 350 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 TMEM179BQ7Z7N9 219 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 SLC22A15Q8IZD6 547 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 RGL4Q8IZJ4 473 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 STK40Q8N2I9 435 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 ZNF420Q8TAQ5 688 aaPredicted RBP16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 SNX19Q92543 992 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 SLC22A12Q96S37 553 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 DPY30Q9C005 99 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 IL26Q9NPH9 171 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 VPS51Q9UID3 782 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 GNGT2O14610 69 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 CA12O43570 354 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 PGRP06401 933 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 MBL2P11226 248 aaPredicted RBP16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 ZNF7P17097 686 aaPredicted RBP16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 AGXTP21549 392 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 CSKP41240 450 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 ANKRD26P1Q6NSI1 321 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 CHST9Q7L1S5 443 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 ANKRD46Q86W74 232 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 ADGRG2Q8IZP9 1017 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 OR8J3Q8NGG0 315 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 OR13F1Q8NGS4 319 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 PIH1D2Q8WWB5 315 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 FAM162AQ96A26 154 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 SLC47A1Q96FL8 570 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 ITCHQ96J02 903 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 PPP3R2Q96LZ3 170 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 MBOAT4Q96T53 435 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 FAM118AQ9NWS6 357 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 OPTCQ9UBM4 332 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 LRFN2Q9ULH4 789 aa16.04■□□□□ 0.16
TM9SF1-201ENST00000261789 SH3PXD2BA1X283 911 aa16.03■□□□□ 0.16
TM9SF1-201ENST00000261789 DYTNA2CJ06 578 aa16.03■□□□□ 0.16
TM9SF1-201ENST00000261789 H7C4K7 107 aa16.03■□□□□ 0.16
TM9SF1-201ENST00000261789 ULK1O75385 1050 aa16.03■□□□□ 0.16
TM9SF1-201ENST00000261789 CPNE6O95741 557 aa16.03■□□□□ 0.16
TM9SF1-201ENST00000261789 C1QCP02747 245 aa16.03■□□□□ 0.16
TM9SF1-201ENST00000261789 CRHBPP24387 322 aa16.03■□□□□ 0.16
TM9SF1-201ENST00000261789 NFATC3Q12968 1075 aa16.03■□□□□ 0.16
TM9SF1-201ENST00000261789 NFATC2Q13469 925 aa16.03■□□□□ 0.16
TM9SF1-201ENST00000261789 CPSF6Q16630 551 aaKnown RBP eCLIP16.03■□□□□ 0.16
TM9SF1-201ENST00000261789 CTU2Q2VPK5 515 aaKnown RBP16.03■□□□□ 0.16
TM9SF1-201ENST00000261789 ARMC12Q5T9G4 340 aa16.03■□□□□ 0.16
TM9SF1-201ENST00000261789 LRRC8DQ7L1W4 858 aa16.03■□□□□ 0.16
TM9SF1-201ENST00000261789 NECAB2Q7Z6G3 386 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms