RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 FAM210AQ96ND0 272 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 PRPF19Q9UMS4 504 aaKnown RBP14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 NDUFAF1Q9Y375 327 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 LRATO95237 230 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 MTHFD1P11586 935 aaKnown RBP14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 EFNA1P20827 205 aaPredicted RBP14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 HK2P52789 917 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 SH3BGRP55822 239 aaPredicted RBP14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 PTSQ03393 145 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 GTF2H2Q13888 395 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 UGT3A2Q3SY77 523 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 GTF2H2CQ6P1K8 395 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 TICAM1Q8IUC6 712 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 SPPL2CQ8IUH8 684 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 ZBTB2Q8N680 514 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 ARMC7Q9H6L4 198 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 SPHK2Q9NRA0 654 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 SUN2Q9UH99 717 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 RSL24D1Q9UHA3 163 aaKnown RBP14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 GNPTGQ9UJJ9 305 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 PRKAB1Q9Y478 270 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 ZSCAN9O15535 394 aaPredicted RBP14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 FZD6O60353 706 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 LILRB3O75022 631 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 ZNF26P17031 533 aaPredicted RBP14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 NR4A1P22736 598 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 PRDX6P30041 224 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 BMPR1AP36894 532 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 APOFQ13790 326 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 PTGR1Q14914 329 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 GRIN2CQ14957 1233 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 ACOX1Q15067 660 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 ATP6AP1LQ52LC2 224 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 CARD16Q5EG05 197 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 GOLGA7Q7Z5G4 137 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 OFCC1Q8IZS5 231 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 LRRC3Q9BY71 257 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 FAM126AQ9BYI3 521 aaPredicted RBP14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 ACTR8Q9H981 624 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 AKAP10O43572 662 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 KCNK10P57789 538 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 ABRAXAS2Q15018 415 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 LILRA6Q6PI73 481 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 VRK3Q8IV63 474 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 FAM47BQ8NA70 645 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 MED8Q96G25 268 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 LRRC3BQ96PB8 259 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 SEPHS2Q99611 448 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 TRMOQ9BU70 441 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 SLC25A23Q9BV35 468 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 WBP1LQ9NX94 342 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 OPTCQ9UBM4 332 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 CDC14AQ9UNH5 594 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 DHRS7Q9Y394 339 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 AP4S1Q9Y587 144 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 PCDHGA7Q9Y5G6 932 aa14.37□□□□□ -0.11
TRAFD1-201ENST00000257604 PRSS51A0A1B0GVH4 220 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 GAPDHSO14556 408 aaPredicted RBP14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 RAD51BO15315 384 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 BCAS2O75934 225 aaPredicted RBP14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 ACRV1P26436 265 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 PREPP48147 710 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 FBXO46Q6PJ61 603 aaPredicted RBP14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 XKR5Q6UX68 686 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 NXPE1Q8N323 547 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 RHEBL1Q8TAI7 183 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 SPPL3Q8TCT6 385 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 SMG7Q92540 1137 aaKnown RBP14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 ELMO1Q92556 727 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 RIOK2Q9BVS4 552 aaKnown RBP14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 ELOVL2Q9NXB9 296 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 RFXAPO00287 272 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 ACOT8O14734 319 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 SLC7A9P82251 487 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 SF1Q15637 639 aaKnown RBP14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 AP5B1Q2VPB7 878 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 ZFP1Q6P2D0 407 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 UTS2BQ765I0 119 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 GET4Q7L5D6 327 aaPredicted RBP14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 PELI3Q8N2H9 469 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 STK40Q8N2I9 435 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 MAELQ96JY0 434 aaKnown RBP14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 RAD9AQ99638 391 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 SPAG4Q9NPE6 437 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 ANAPC1Q9H1A4 1944 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 E2F3O00716 465 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 ESRRBO95718 433 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 G6PDP11413 515 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 RPIAP49247 311 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 SLC2A7Q6PXP3 512 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 HSD11B1LQ7Z5J1 315 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 PEX13Q92968 403 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 TBCDQ9BTW9 1192 aa14.36□□□□□ -0.11
TRAFD1-201ENST00000257604 NOTCH4Q99466 2003 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 TMEM202A6NGA9 273 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 LOC730098B7Z3J9 87 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 SEC22BO75396 215 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 WISP3O95389 354 aaPredicted RBP14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 DGKAP23743 735 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms