RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 XKR6Q5GH73 641 aa12.97□□□□□ -0.33
PCDHGA3-201ENST00000253812 NIPA1Q7RTP0 329 aa12.97□□□□□ -0.33
PCDHGA3-201ENST00000253812 NT5DC4Q86YG4 428 aa12.97□□□□□ -0.33
PCDHGA3-201ENST00000253812 PDZD9Q8IXQ8 264 aa12.97□□□□□ -0.33
PCDHGA3-201ENST00000253812 YAF2Q8IY57 180 aa12.97□□□□□ -0.33
PCDHGA3-201ENST00000253812 SLC7A5P1Q8MH63 180 aa12.97□□□□□ -0.33
PCDHGA3-201ENST00000253812 CRYBG2Q8N1P7 616 aa12.97□□□□□ -0.33
PCDHGA3-201ENST00000253812 DNAJC19Q96DA6 116 aa12.97□□□□□ -0.33
PCDHGA3-201ENST00000253812 LINGO1Q96FE5 620 aa12.97□□□□□ -0.33
PCDHGA3-201ENST00000253812 MKRN2Q9H000 416 aaKnown RBP12.97□□□□□ -0.33
PCDHGA3-201ENST00000253812 USP29Q9HBJ7 922 aa12.97□□□□□ -0.33
PCDHGA3-201ENST00000253812 TCF7L1Q9HCS4 588 aa12.97□□□□□ -0.33
PCDHGA3-201ENST00000253812 FARSBQ9NSD9 589 aaKnown RBP12.97□□□□□ -0.33
PCDHGA3-201ENST00000253812 ZDHHC18Q9NUE0 388 aa12.97□□□□□ -0.33
PCDHGA3-201ENST00000253812 TMEM184CQ9NVA4 438 aa12.97□□□□□ -0.33
PCDHGA3-201ENST00000253812 RBMXL2O75526 392 aaKnown RBP12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 PTTG1O95997 202 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 EGFRP00533 1210 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 CD86P42081 329 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 MATKP42679 507 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 NFE2L1Q14494 772 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 MFSD2AQ8NA29 543 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 PIWIL1Q96J94 861 aaKnown RBP12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 DUSP16Q9BY84 665 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 ASB8Q9H765 288 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 IFT46Q9NQC8 304 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 POLE4Q9NR33 117 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 CMAHPQ9Y471 501 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 LOC100130705A0A1B0GUX0 176 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 C2orf74A8MZ97 194 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 ISM1B1AKI9 464 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 WNT7AO00755 349 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 FPGTO14772 594 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 KMOO15229 486 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 HLA-DPB1P04440 258 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 RPS2P15880 293 aaKnown RBP12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 CPN2P22792 545 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 MAP2K3P46734 347 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 FUT2Q10981 343 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 CLEC6AQ6EIG7 209 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 RNF180Q86T96 592 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 GOLM1Q8NBJ4 401 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 ZNF248Q8NDW4 579 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 CD300LFQ8TDQ1 290 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 KLHL6Q8WZ60 621 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 TMBIM1Q969X1 311 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 APOLD1Q96LR9 279 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 CPXM1Q96SM3 734 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 OSMRQ99650 979 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 FBXO44Q9H4M3 255 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 METTL8Q9H825 291 aaKnown RBP12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 FAM105AQ9NUU6 356 aa12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.96□□□□□ -0.33
PCDHGA3-201ENST00000253812 ATRNO75882 1429 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 NME6O75414 186 aaPredicted RBP12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 PPP5CP53041 499 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 RAPSNQ13702 412 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 FAM122CQ6P4D5 195 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 ZDHHC24Q6UX98 284 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 CHERPQ8IWX8 916 aaKnown RBP12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 SDR16C5Q8N3Y7 309 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 TSEN15Q8WW01 171 aaKnown RBP12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 P2RY11Q96G91 374 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 RDH12Q96NR8 316 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 MAF1Q9H063 256 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 ABCG8Q9H221 673 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 TM9SF3Q9HD45 589 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 NECTIN3Q9NQS3 549 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 MARK1Q9P0L2 795 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 CNTN6Q9UQ52 1028 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 TIMM22Q9Y584 194 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 ASTN1O14525 1302 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 ARPC2O15144 300 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 BUD23O43709 281 aaKnown RBP12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 KERAO60938 352 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 DBIP07108 87 aaKnown RBP12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 TCEA1P23193 301 aaKnown RBP12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 ADORA2AP29274 412 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 BCL2L1Q07817 233 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 TMEM132BQ14DG7 1078 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 ZNF782Q6ZMW2 699 aaPredicted RBP12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 MARCH9Q86YJ5 346 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 TREML1Q86YW5 311 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 SLC2A14Q8TDB8 520 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 COL26A1Q96A83 441 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 PPIL3Q9H2H8 161 aaKnown RBP12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 KCNMB3Q9NPA1 279 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 C11orf16Q9NQ32 467 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 ITM2CQ9NQX7 267 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 TVP23BQ9NYZ1 205 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 ACTR3BQ9P1U1 418 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 COPZ2Q9P299 210 aa12.96□□□□□ -0.34
PCDHGA3-201ENST00000253812 C9JVG2 144 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 GADD45GO95257 159 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 RASGRP1O95267 797 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 KCNA5P22460 613 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 FECHP22830 423 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 DNAJA1P31689 397 aaKnown RBP12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 RGS6P49758 472 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 PRMT2P55345 433 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms