RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 RGS4P49798 205 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 SERPINB8P50452 374 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 ACSBG2Q5FVE4 666 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 MROH9Q5TGP6 573 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 TMEM207Q6UWW9 146 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 LRIG3Q6UXM1 1119 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 NAPRTQ6XQN6 538 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 CYHR1Q6ZMK1 362 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 ARL14Q8N4G2 192 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 NKAPQ8N5F7 415 aaKnown RBP13.78□□□□□ -0.2
VPS25-201ENST00000253794 SPDYE1Q8NFV5 336 aaPredicted RBP13.78□□□□□ -0.2
VPS25-201ENST00000253794 MAPK15Q8TD08 544 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 FAM136AQ96C01 138 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 MRRFQ96E11 262 aaKnown RBP13.78□□□□□ -0.2
VPS25-201ENST00000253794 UBXN10Q96LJ8 280 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 MVB12BQ9H7P6 319 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 SYTL2Q9HCH5 934 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 FAM8A1Q9UBU6 413 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 LGALS13Q9UHV8 139 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 PSMD13Q9UNM6 376 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 ARHGEF17Q96PE2 2063 aaPredicted RBP13.78□□□□□ -0.2
VPS25-201ENST00000253794 IQANK1A0A1B0GTG1 560 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 EME2A4GXA9 379 aaPredicted RBP13.77□□□□□ -0.21
VPS25-201ENST00000253794 SLC30A4O14863 429 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 SH3BP5O60239 455 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 PSIP1O75475 530 aaKnown RBP13.77□□□□□ -0.21
VPS25-201ENST00000253794 SLC35E2BP0CK96 405 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 CSRP1P21291 193 aaKnown RBP13.77□□□□□ -0.21
VPS25-201ENST00000253794 PTPRZ1P23471 2315 aaPredicted RBP13.77□□□□□ -0.21
VPS25-201ENST00000253794 DUSP3P51452 185 aaPredicted RBP13.77□□□□□ -0.21
VPS25-201ENST00000253794 SLC12A2P55011 1212 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 IL2P60568 153 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 BMPR2Q13873 1038 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 NR0B2Q15466 257 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 SEPT7Q16181 437 aaKnown RBP13.77□□□□□ -0.21
VPS25-201ENST00000253794 GLRX5Q86SX6 157 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 SLC9B2Q86UD5 537 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 SFTPA2Q8IWL1 248 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 CPNE9Q8IYJ1 553 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 KIAA2013Q8IYS2 634 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 TBC1D21Q8IYX1 336 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 FBXO15Q8NCQ5 510 aaPredicted RBP13.77□□□□□ -0.21
VPS25-201ENST00000253794 RHBDD1Q8TEB9 315 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 EEF1AKMT1Q8WVE0 214 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 PATE1Q8WXA2 126 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 TFGQ92734 400 aaPredicted RBP13.77□□□□□ -0.21
VPS25-201ENST00000253794 FAM122AQ96E09 287 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 C12orf66Q96MD2 445 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 CDC6Q99741 560 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 CEP250Q9BV73 2442 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 CAB39LQ9H9S4 337 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 GPAMQ9HCL2 828 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 SNX15Q9NRS6 342 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 EVA1BQ9NVM1 165 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 CPNE7Q9UBL6 633 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 PLAAQ9Y263 795 aa13.77□□□□□ -0.21
VPS25-201ENST00000253794 CCDC189A1A4V9 331 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 LILRA5A6NI73 299 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 OR52A4PA6NMU1 304 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 TRIM49D1C9J1S8 452 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 GFYI3L273 518 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 RASGRF2O14827 1237 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 RFPL1O75677 317 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 RPN2P04844 631 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 GLB1P16278 677 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 ACP1P24666 158 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 CCNFP41002 786 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 ZNF844Q08AG5 666 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 SP140Q13342 867 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 ZNF460Q14592 562 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 FBXO38Q6PIJ6 1188 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 CMC1Q7Z7K0 106 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 CROCCP2Q86T23 111 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 OR2W6PQ8NHA6 318 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 OR5K2Q8NHB8 316 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 ACMSDQ8TDX5 336 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 EPS8L3Q8TE67 593 aaKnown RBP13.76□□□□□ -0.21
VPS25-201ENST00000253794 ASB11Q8WXH4 323 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 NAT6Q93015 286 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 SH3KBP1Q96B97 665 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 LINGO1Q96FE5 620 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 DERL2Q9GZP9 239 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 TWSG1Q9GZX9 223 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 STN1Q9H668 368 aaKnown RBP13.76□□□□□ -0.21
VPS25-201ENST00000253794 KIR3DX1Q9H7L2 352 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 SLC40A1Q9NP59 571 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 FTSJ1Q9UET6 329 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 PADI4Q9UM07 663 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 COLEC10Q9Y6Z7 277 aa13.76□□□□□ -0.21
VPS25-201ENST00000253794 A0A087X1B8 175 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 PPM1DO15297 605 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 SLC16A5O15375 505 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 PHGDHO43175 533 aaKnown RBP13.75□□□□□ -0.21
VPS25-201ENST00000253794 TNFSF14O43557 240 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 LDOC1O95751 146 aaPredicted RBP13.75□□□□□ -0.21
VPS25-201ENST00000253794 VIPP01282 170 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 MPOP05164 745 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 C2P06681 752 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 GP1BAP07359 652 aa13.75□□□□□ -0.21
VPS25-201ENST00000253794 CKMT2P17540 419 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms