RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 PTPRCAPQ14761 206 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 FXNQ16595 210 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 PARP15Q460N3 678 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 ANKS6Q68DC2 871 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 TMEM214Q6NUQ4 689 aaKnown RBP16.7■□□□□ 0.26
FOXA1-201ENST00000250448 BBS7Q8IWZ6 715 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 SLC15A4Q8N697 577 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 ST13P5Q8NFI4 369 aaPredicted RBP16.7■□□□□ 0.26
FOXA1-201ENST00000250448 GPR150Q8NGU9 434 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 FATE1Q969F0 183 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 AARSD1Q9BTE6 412 aaKnown RBP16.7■□□□□ 0.26
FOXA1-201ENST00000250448 HTATIP2Q9BUP3 242 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 NUSAP1Q9BXS6 441 aaKnown RBP16.7■□□□□ 0.26
FOXA1-201ENST00000250448 BRINP2Q9C0B6 783 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 NANOGQ9H9S0 305 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 RNF112Q9ULX5 631 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 PCDHGA11Q9Y5H2 935 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.7■□□□□ 0.26
FOXA1-201ENST00000250448 RHOCP08134 193 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 RPS17P08708 135 aaKnown RBP16.7■□□□□ 0.26
FOXA1-201ENST00000250448 POLR2JP52435 117 aaKnown RBP16.7■□□□□ 0.26
FOXA1-201ENST00000250448 ARSFP54793 590 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 ZNF177Q13360 481 aaPredicted RBP16.7■□□□□ 0.26
FOXA1-201ENST00000250448 NR1D2Q14995 579 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 FBXO48Q5FWF7 155 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 RNF219Q5W0B1 726 aaPredicted RBP16.7■□□□□ 0.26
FOXA1-201ENST00000250448 ADGRD2Q7Z7M1 963 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 RIMKLAQ8IXN7 391 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 TRUB1Q8WWH5 349 aaKnown RBP16.7■□□□□ 0.26
FOXA1-201ENST00000250448 KIAA1191Q96A73 305 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 NSMCE2Q96MF7 247 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 C1orf50Q9BV19 199 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 ING2Q9H160 280 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 PIF1Q9H611 641 aa16.7■□□□□ 0.26
FOXA1-201ENST00000250448 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.7■□□□□ 0.263e-6■□□□□ 11.1
FOXA1-201ENST00000250448 DNMT3BQ9UBC3 853 aaKnown RBP16.7■□□□□ 0.26
FOXA1-201ENST00000250448 DENND4CQ5VZ89 1909 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 TMEM221A6NGB7 291 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 OLFM2O95897 454 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 ENO2P09104 434 aaPredicted RBP16.69■□□□□ 0.26
FOXA1-201ENST00000250448 MZF1P28698 734 aaPredicted RBP16.69■□□□□ 0.26
FOXA1-201ENST00000250448 ALDH3A2P51648 485 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 EMX2Q04743 252 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 TUBA3CQ13748 450 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 DAG1Q14118 895 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 TEAD2Q15562 447 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 C5orf22Q49AR2 442 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 XKR7Q5GH72 579 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 GALNT18Q6P9A2 607 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 ARRDC2Q8TBH0 407 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 BLOC1S5Q8TDH9 187 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 RAB2BQ8WUD1 216 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 ING5Q8WYH8 240 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 NRBF2Q96F24 287 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 NTN4Q9HB63 628 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 SELENONQ9NZV5 590 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 CORINQ9Y5Q5 1042 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 HCFC2Q9Y5Z7 792 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 ARL5AQ9Y689 179 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 LOC285095A0A1B0GVY8 99 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 SNX2O60749 519 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 PRAMEF11O60813 436 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 SERPINB7O75635 380 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 RPP40O75818 363 aaKnown RBP16.69■□□□□ 0.26
FOXA1-201ENST00000250448 CRY1Q16526 586 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 XAF1Q6GPH4 301 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 EFL1Q7Z2Z2 1120 aaKnown RBP16.69■□□□□ 0.26
FOXA1-201ENST00000250448 SYVN1Q86TM6 617 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 C12orf76Q8N812 135 aaPredicted RBP16.69■□□□□ 0.26
FOXA1-201ENST00000250448 STAG3L4Q8TBR4 150 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 TADA1Q96BN2 335 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 ZNF599Q96NL3 588 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 PFDN4Q9NQP4 134 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 CATSPERZQ9NTU4 200 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 MAGEL2Q9UJ55 1249 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 IKZF3Q9UKT9 509 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 CLEC4EQ9ULY5 219 aa16.69■□□□□ 0.26
FOXA1-201ENST00000250448 SOBPA7XYQ1 873 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 CFAP99D6REC4 459 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 H0Y626 953 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 ABCB7O75027 752 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 ECI2O75521 394 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 ESRRBO95718 433 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 THRBP10828 461 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 OGNP20774 298 aaKnown RBP16.68■□□□□ 0.26
FOXA1-201ENST00000250448 YBEYP58557 167 aaPredicted RBP16.68■□□□□ 0.26
FOXA1-201ENST00000250448 IL10RBQ08334 325 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 CBX2Q14781 532 aaPredicted RBP16.68■□□□□ 0.26
FOXA1-201ENST00000250448 CXorf57Q6NSI4 855 aaKnown RBP16.68■□□□□ 0.26
FOXA1-201ENST00000250448 DHRS1Q96LJ7 313 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 SEMA3CQ99985 751 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 GPN2Q9H9Y4 310 aaPredicted RBP16.68■□□□□ 0.26
FOXA1-201ENST00000250448 MAFFQ9ULX9 164 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 A0A1B0GVM2 712 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 FAM234BA2RU67 622 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 UPK1AO00322 258 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 DEAF1O75398 565 aaPredicted RBP16.68■□□□□ 0.26
FOXA1-201ENST00000250448 CLDN11O75508 207 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 SULT1C4O75897 302 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 CHEK2O96017 543 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms