RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 ALDH7A1P49419 539 aaKnown RBP21.24■□□□□ 0.99
SH2D3A-201ENST00000245908 SMAD3P84022 425 aaKnown RBP21.24■□□□□ 0.99
SH2D3A-201ENST00000245908 MAD2L1Q13257 205 aaPredicted RBP21.24■□□□□ 0.99
SH2D3A-201ENST00000245908 FAM98BQ52LJ0 330 aaKnown RBP21.24■□□□□ 0.99
SH2D3A-201ENST00000245908 SULT1C3Q6IMI6 304 aa21.24■□□□□ 0.99
SH2D3A-201ENST00000245908 TM6SF2Q9BZW4 377 aa21.24■□□□□ 0.99
SH2D3A-201ENST00000245908 CD244Q9BZW8 370 aa21.24■□□□□ 0.99
SH2D3A-201ENST00000245908 SOX17Q9H6I2 414 aaPredicted RBP21.24■□□□□ 0.99
SH2D3A-201ENST00000245908 PKD2L2Q9NZM6 624 aa21.24■□□□□ 0.99
SH2D3A-201ENST00000245908 VAPAQ9P0L0 249 aa21.24■□□□□ 0.99
SH2D3A-201ENST00000245908 OPTCQ9UBM4 332 aa21.24■□□□□ 0.99
SH2D3A-201ENST00000245908 EBF1Q9UH73 591 aa21.24■□□□□ 0.99
SH2D3A-201ENST00000245908 H0Y858 1186 aa21.23■□□□□ 0.99
SH2D3A-201ENST00000245908 SLC28A1O00337 649 aa21.23■□□□□ 0.99
SH2D3A-201ENST00000245908 SCAMP3O14828 347 aaKnown RBP21.23■□□□□ 0.99
SH2D3A-201ENST00000245908 WDR47O94967 919 aa21.23■□□□□ 0.99
SH2D3A-201ENST00000245908 TRBC1P01850 177 aa21.23■□□□□ 0.99
SH2D3A-201ENST00000245908 TTKP33981 857 aa21.23■□□□□ 0.99
SH2D3A-201ENST00000245908 CTBSQ01459 385 aa21.23■□□□□ 0.99
SH2D3A-201ENST00000245908 PHKG1Q16816 387 aa21.23■□□□□ 0.99
SH2D3A-201ENST00000245908 LYPLAL1Q5VWZ2 237 aa21.23■□□□□ 0.99
SH2D3A-201ENST00000245908 TMEM214Q6NUQ4 689 aaKnown RBP21.23■□□□□ 0.99
SH2D3A-201ENST00000245908 ZBTB2Q8N680 514 aa21.23■□□□□ 0.99
SH2D3A-201ENST00000245908 EGFL8Q99944 293 aa21.23■□□□□ 0.99
SH2D3A-201ENST00000245908 C17orf80Q9BSJ5 609 aa21.23■□□□□ 0.99
SH2D3A-201ENST00000245908 GORASP2Q9H8Y8 452 aa21.23■□□□□ 0.99
SH2D3A-201ENST00000245908 IL26Q9NPH9 171 aa21.23■□□□□ 0.99
SH2D3A-201ENST00000245908 TLR9Q9NR96 1032 aa21.23■□□□□ 0.99
SH2D3A-201ENST00000245908 WWOXQ9NZC7 414 aa21.23■□□□□ 0.99
SH2D3A-201ENST00000245908 ANGPTL3Q9Y5C1 460 aa21.23■□□□□ 0.99
SH2D3A-201ENST00000245908 C1orf232A0A0U1RR37 186 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 DFNA5O60443 496 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 TRIM16O95361 564 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 ALBP02768 609 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 ALDH3A2P51648 485 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 ARSFP54793 590 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 CDKN3Q16667 212 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 GPRC6AQ5T6X5 926 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 METTL2BQ6P1Q9 378 aaKnown RBP21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 CLDN19Q8N6F1 224 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 OR6K2Q8NGY2 324 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 GTF2H4Q92759 462 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 C12orf43Q96C57 262 aaKnown RBP21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 RHBDF1Q96CC6 855 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 APOL5Q9BWW9 433 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 PLGRKTQ9HBL7 147 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 TRPS1Q9UHF7 1281 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 GREM1O60565 184 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 AKT1P31749 480 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 NUP107P57740 925 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 CHRNB3Q05901 458 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 CDH18Q13634 790 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 DAG1Q14118 895 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 PTGR1Q14914 329 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 CCNYL2Q5T2Q4 361 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 TPGS2Q68CL5 300 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 KIAA1841Q6NSI8 718 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 MACC1Q6ZN28 852 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 GLB1L3Q8NCI6 653 aaPredicted RBP21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 TMBIM1Q969X1 311 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 ASIC5Q9NY37 505 aa21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 EVLQ9UI08 416 aaPredicted RBP21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 FAF1Q9UNN5 650 aaPredicted RBP21.22■□□□□ 0.99
SH2D3A-201ENST00000245908 GMNNO75496 209 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 NFKBIAP25963 317 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 GDF5P43026 501 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 HLCSP50747 726 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 BCL2L1Q07817 233 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 PMS2P3Q13401 168 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 PLA2G4EQ3MJ16 856 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 OTUD3Q5T2D3 398 aaPredicted RBP21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 TRIM46Q7Z4K8 759 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 TMEM150AQ86TG1 271 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 ZNF548Q8NEK5 533 aaPredicted RBP21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 OR2T12Q8NG77 320 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 ZNF420Q8TAQ5 688 aaPredicted RBP21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 ADAMTS19Q8TE59 1207 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 IGSF21Q96ID5 467 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 NTMT1Q9BV86 223 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 CXorf21Q9HAI6 301 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 K7EPI3 171 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 FFAR3O14843 346 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 GPR42O15529 346 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 PORP16435 677 aaPredicted RBP21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 BPIP17213 487 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 PLIN5Q00G26 463 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 VEPH1Q14D04 833 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 PNPT1Q8TCS8 783 aaKnown RBP21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 UGT2B28Q9BY64 529 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 HIPK3Q9H422 1215 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 RDH14Q9HBH5 336 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 KLQ9UEF7 1012 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 CDH7Q9ULB5 785 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 CDC14AQ9UNH5 594 aa21.21■□□□□ 0.99
SH2D3A-201ENST00000245908 SCN5AQ14524 2016 aa21.2■□□□□ 0.98
SH2D3A-201ENST00000245908 GLYATL1P3A0A0U1RQE8 302 aa21.2■□□□□ 0.98
SH2D3A-201ENST00000245908 PITPNM1O00562 1244 aa21.2■□□□□ 0.98
SH2D3A-201ENST00000245908 SMAD6O43541 496 aaKnown RBP21.2■□□□□ 0.98
SH2D3A-201ENST00000245908 CLDN7O95471 211 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms